| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1682 |
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| Symbol | |
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| ID | 4078258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1779272 |
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| End bp | 1779922 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638006995 |
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| Product | hypothetical protein |
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| Protein accession | YP_613677 |
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| Protein GI | 99081523 |
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| COG category | [K] Transcription |
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| COG ID | [COG2932] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.704412 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATGG GTGAGATTTT GGCTCGGATC ACCGAGCGCC GTGAAGAGCT GAAGTTGTCC
GAGCAGGCCT TGGCGCTCCA ATCTGGAATG TCAAAGGACG GCATTCGAAA TTGGAGAAGG
CGCTTTGAAG CTGGAGACGA CAACGCCGGA GCGAACGTCA GTTCAATCAG CAAAGTTGCC
TCGACATTAG GTGTCTCAGA ACTCTGGCTG CTTCACGGTA TAGGCGAGAG TAAAACCCCC
ACCATCTCGA TCGCGGGCAA AGTAGGTGCT GGCTCTCAAG TCCCTGTTTT CGACGCCTAC
GAGAAAGGCG ATGGCCCACA GGTCGAGTGC CCACCTGGTA TTGGACCGCA CGGCGTTGTA
GCGGTTGAGG TTGAAGGTGA CAGTATGGAG CCAGTATATT CCGCTGGGGA TCTACTGTTC
TACTCGCGCA ACGGTCATGA CAGCGTTCCC GACGACGTGG TCGGCTACAA GTGCGTTTGC
GAAGACGCGG ACGGCATGGG CTGGGTGAAG CAAGTCAAAG CGGGTGATGA GCCGGGCCTG
TTCCACCTGA TCTCGCTCAA CCCCACCGGC GCAAACATGT GGAACGTGCG CCTCAAGTGG
GCCGCCCGCG TGCGCCTGCA CTGGCCTGCG GAGTTTGCGA GGAAGAAGTA A
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| Protein sequence | MDMGEILARI TERREELKLS EQALALQSGM SKDGIRNWRR RFEAGDDNAG ANVSSISKVA
STLGVSELWL LHGIGESKTP TISIAGKVGA GSQVPVFDAY EKGDGPQVEC PPGIGPHGVV
AVEVEGDSME PVYSAGDLLF YSRNGHDSVP DDVVGYKCVC EDADGMGWVK QVKAGDEPGL
FHLISLNPTG ANMWNVRLKW AARVRLHWPA EFARKK
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