| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1671 |
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| Symbol | |
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| ID | 4075774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1770902 |
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| End bp | 1772683 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638006984 |
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| Product | phage terminase |
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| Protein accession | YP_613666 |
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| Protein GI | 99081512 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4626] Phage terminase-like protein, large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCCT CGGAGCGCAT TGACCAGACC ACGCGATACG CGCGGGATGT GGTTTCGGGA
AAGATCGTAG CGGGCGCATT CGTGCGGGCG CAATGCCAGC GGCACCTAGA TGATCTGAAG
CATGGCCCGG CGCGCGGGTT GCAGTGGGAT ATTGAGCAGG CCGAGCGGGC CATTCGGTTC
TTTCCGGCCA TGTTGTCGAT CACCGAAGGG GCCAAGGAGG GCGAGCCATT CAAGCTGCTG
CCCTGGCACT TGTTCGTGGT AGGGTCGATT TTCGGCTGGC GAACAGCGGA AGGTTTCATC
CGGTTCCGGT TCGTGTGGCT GGAAACCGGC AAGGGGCAAG CGAAATCGCC GCTCATGGCG
GCTGTAGGTA TCTATCTCAG CGGGTTCTAT GGCCGGAAGC GGGCCGAGGT CTACTGCATC
GGGGAAACGA AGGACACGGC GCGGGTTATG TTCCGCGATG CGGTGGCGAT GCTTCGGGCG
CCGATCCCAG GCAAAGGCGG CATGACGCTG GAAGACGCGG CGTTTGTGAT CCGCGGCACC
GGCGACCTTG CCTACAGCGT CGAGCATCCC GACAGCGGAT CATTCATGCG GCCCATCGCG
AACAATGACA GCGTTTCGGG GCCAAAGCCG ATCCTTGTGG CTGGCGATGA GATCCACGAG
ATGAAAAGCG GCAAGGCGAT TGAGATGTGG CGGGCCGCAG TCACCAAGAA ACACGGTGAC
AGCATACTGA TGCTTGGAAC GAACACCCCA AGCGCAGACC AGCAGGTGGG GACGGACTAC
AGCGAGTTTT GCCAGAAGGT GGTGACCGGC GACTTCACTG ACGACAGCGT GTTTGCATAT
ATCGCGCGGG TGGACGAGGG CGACGACCCG CTGGAAGACG AAAGCTGCTG GGTTAAGGCG
TTGCCCGCCC TGGGCATCAC CTATCCGGTG GACAACGTGC GCAAGCTGGT AGTGACGGCG
AAACAGCAGA TCAGCACGCA GCTGACCACA AAGCGCCTGT ATTTCGGAAT CCCGGTAGGC
TCTGCAGGGT TCTGGACCTC TGAGCAGGCA TGGAAGGAAG TGCAGGGCAA GGTCGATGAT
GCGAAGATGA TCGGCCGCCG GGCGCATTTG GCGCTCGACC TCTCCGAGAA GAACGACCTC
ACCGCGCTCG CGGTGGCGTG GGAGGGCGAA AGGATCGATG TCAAATCATG GTATTGGACT
CGTGAATTTG AGATCGAAGA GCGATCAACG GCAGATGCGA TCCCTTATCG CGAGTTGGAA
GCGGCGGACC TGATAGAAGT CACGCCGGGG CGCGTAATCG ACTACACGTT CATTGCGGCG
AAGATTATCG ACTTTTGTGG ACGCCACTCA GTGGTGCAGA TGGCTATCGA CAGCGCCCAC
ATGGAAAAGC TCTGCGAGGC CTTCGATAAG GCGGGTTTCG CGTATTGGAT CGAAGAAGGC
GACGACAAGC CGGGCAGCGG CCTGAAAATT GTCAGGCATA AGCAAGGCAC GAACGTCAGC
TTCGACGGAA AGTTCCTCTG TATGCCGACT TCGATCACAC AGCTTGAGGA CCACATGCTG
AAAGGCACGG TCAAGATCGA TCGCAACAAG CTCACCAGCA TCTGCGCGCG CAACGCGATC
ATCCGCGAGG ATGGTTTCGG CAACCGGATG TTCGACAAAT CACGTTCGCG GGGCCGGATC
GATGGGGTTG TCACCCTAGC GATGGCCGTA GGGTCAGCCA CCGCGGCGAT GAAAACGAAG
TCCGGATTGG ACGACTATTT TGCTTCACTT GGGGGCGGCT AA
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| Protein sequence | MSSSERIDQT TRYARDVVSG KIVAGAFVRA QCQRHLDDLK HGPARGLQWD IEQAERAIRF
FPAMLSITEG AKEGEPFKLL PWHLFVVGSI FGWRTAEGFI RFRFVWLETG KGQAKSPLMA
AVGIYLSGFY GRKRAEVYCI GETKDTARVM FRDAVAMLRA PIPGKGGMTL EDAAFVIRGT
GDLAYSVEHP DSGSFMRPIA NNDSVSGPKP ILVAGDEIHE MKSGKAIEMW RAAVTKKHGD
SILMLGTNTP SADQQVGTDY SEFCQKVVTG DFTDDSVFAY IARVDEGDDP LEDESCWVKA
LPALGITYPV DNVRKLVVTA KQQISTQLTT KRLYFGIPVG SAGFWTSEQA WKEVQGKVDD
AKMIGRRAHL ALDLSEKNDL TALAVAWEGE RIDVKSWYWT REFEIEERST ADAIPYRELE
AADLIEVTPG RVIDYTFIAA KIIDFCGRHS VVQMAIDSAH MEKLCEAFDK AGFAYWIEEG
DDKPGSGLKI VRHKQGTNVS FDGKFLCMPT SITQLEDHML KGTVKIDRNK LTSICARNAI
IREDGFGNRM FDKSRSRGRI DGVVTLAMAV GSATAAMKTK SGLDDYFASL GGG
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