Gene TM1040_1614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1614 
Symbol 
ID4077716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1725189 
End bp1725638 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content59% 
IMG OID638006927 
Producthypothetical protein 
Protein accessionYP_613609 
Protein GI99081455 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.649556 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCACC AGACCGCCTC TGGGGTGACA CTCGGCATTT CGGCCGCTGC ACCCGCAACT 
CACGACATCA CCGGCTTTGA CGCTCTCACC TTCACTTCCG TTGGTGAAAT CACGAACGTG
GGTGAGTTCG GCAAGGAGTG GCAACTTGTG ACTCACAACC CGCTGGCCAC CCGCGGGACG
AAGAAAGGCA AGGGTAGCTT CAATAACGGC ACCCTGAGCC CCAGCCTCGC GCTTGACCCC
GACGACGCCG GCCAAGCTGC AATGGAAACC GCTCTCGAAA GCGATGATCC TGTCTACATC
GCCGTGACAC TCCAAGATGG CACGATCTAC TACCTTGTGG GTCTGGTCAT GTCGTTCAAG
CCGAGCATCG GCGGTGTCGA TGACGTTGTG ACGGCGACCA CCTCGATTGA GATCATGCCT
GACGAGATCC TGAAGAAAGC CGCAGCCTAA
 
Protein sequence
MAHQTASGVT LGISAAAPAT HDITGFDALT FTSVGEITNV GEFGKEWQLV THNPLATRGT 
KKGKGSFNNG TLSPSLALDP DDAGQAAMET ALESDDPVYI AVTLQDGTIY YLVGLVMSFK
PSIGGVDDVV TATTSIEIMP DEILKKAAA