| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1531 |
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| Symbol | |
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| ID | 4075829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1634991 |
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| End bp | 1636193 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638006844 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_613526 |
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| Protein GI | 99081372 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.447397 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGCCG CATCTGATAC CACCGCCCCC GCGCGTTTGC CCCACGGTGC CCTCAAAGGC
GTAAAAGTGC TGGATCTCTC GCGCATCCTG GCTGGCCCAA CCGCAACGCA ACTTTTGGGA
GATCTGGGCG CCGATGTGAT CAAGGTCGAA AACCCAACCA CGGGCGGCGA CGACACCCGT
CAATGGGGCA AGAGCGTCGC CGAAGATGCT GATCTCACGC CCTATTTCAT GGCCGCCAAC
CGCAACAAAC GCTCGCTCGC GCTGGATATT TCTGCCCCCG AAGGACAGGC CATCATCCGA
CGCCTCGCCG CGCAAGCAGA CGTCTTGATC GAGAACTTCA AACCGGGCGG GCTCGCGAAA
TATGGACTTG ATTACGCCTC CCTGCGCGAA AGCTGCCCAC ATCTGGTCTA TGCGTCGATT
TCCGGCTATG GCCAGACCGG CCCGAACCGT GCAAAGCCCG GCTATGATCT GATGGCACAG
GGCTATGGCG GTATCATGTC CCTTACCGGC GACCCCGAAG GCGCGCCTGT CAAGGTCGGG
GTCGGCATCG CGGATGTGAT GTGCGGAATG TATGCGACCA TCGGCATTCT CTCGGCATTG
CGCCACCGCG ATCTCACGGG CGAAGGCCAG CAGGTCGAAC TTGCCCTGGT GGATGCGCAG
ATCGCCTGGC TGATCAACGA AGGTGTGAGT TACCTCAATA CCGGCCAGAA ACCCGTGCGA
CGCGGCAATG AGCACCCCTC GATCATGCCC TATGGCACCT ATGAAACCCG CGACGGCCAT
GTGATCCTCG CAGTTGGGAA TGATAGTCAG TTTCGCCGAT TTATGGCATT CCTTGCCCTC
GAGGGATTGG CCGAAGATCC CCGATTTGCC ACCAATCCGG CCCGTCTTGA GCATCGCGGC
GCACTCAATG ATATCCTGAT CCCGGCGCTA CAGCGCTATC GCACCGATGA GGTCATTGCC
GCGATGGAAG CCGCCAAGGT GCCCGTCGGC CCGGTCAAGA CACTCGATCA GGTCTTTGAG
ACCGATCAGG TTGCCGCGCG GGACATGGTG GTGACGATGC AGGCCGGTGA CACCGAGGTG
CGGCTCTTGG GCAATCCGCT CAAGTTCTCG CGCACCCCCG TAACCTACCG CAAGGCTCCG
CCCAGATGCG GGGCGGACAG CACGGAGATT CTCGCGTCTG ACGCGCCCTT TGAGACCGAC
TGA
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| Protein sequence | MMAASDTTAP ARLPHGALKG VKVLDLSRIL AGPTATQLLG DLGADVIKVE NPTTGGDDTR
QWGKSVAEDA DLTPYFMAAN RNKRSLALDI SAPEGQAIIR RLAAQADVLI ENFKPGGLAK
YGLDYASLRE SCPHLVYASI SGYGQTGPNR AKPGYDLMAQ GYGGIMSLTG DPEGAPVKVG
VGIADVMCGM YATIGILSAL RHRDLTGEGQ QVELALVDAQ IAWLINEGVS YLNTGQKPVR
RGNEHPSIMP YGTYETRDGH VILAVGNDSQ FRRFMAFLAL EGLAEDPRFA TNPARLEHRG
ALNDILIPAL QRYRTDEVIA AMEAAKVPVG PVKTLDQVFE TDQVAARDMV VTMQAGDTEV
RLLGNPLKFS RTPVTYRKAP PRCGADSTEI LASDAPFETD
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