Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1477 |
Symbol | |
ID | 4077774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 1577426 |
End bp | 1578394 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638006788 |
Product | twin-arginine translocation pathway signal |
Protein accession | YP_613472 |
Protein GI | 99081318 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.214116 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTTT CCCGTAGAAC TCTTTTGAAA TCCGTGGGCC TTGCTGGTGC AGGTCTTGCT GTACCTTCTC TGGGCCAGAT GGCGCTGGCC GCACCAATGG CCCCTGCGCC TGTGCTGCAT CAGTTCCGCC TTGGCGACGC CGTGATTACC GCGCTTCTTG ATGGGCATCT GTCGCTGCCA TCTGGTATGT TCACCGGGGC CGATCCTGAA ACCGTTGCGC AGACGCTTGC CGGGACCTTC TACCGCGAGG ACGCGCAGGG GCTCGAGATC CCGGTCAACG GGTATCTTGT GGAGCGCGCA GGCCAGTACA CCCTCATTGA CACCGGCACG GCTGCGCTGA TGGGGCCGGA GCTTGGCGGG TTGATGGGGG CCCTCGCCGC GACAGGCGTG ACGCCCGATC AGATCTCCAC GATCTTGTTG ACCCATATGC ATCCGGATCA CGCGGGTGGT CTTTTGAATG CGGACGGCAG CGCGGCCTTT CCCAATGCAG AGTTGGTGGT GGCCGACGCC GAGTGGGGGT TCTGGCACGA CGATGCGATT ATGGCCTCCG TCGACGAAGG CAGTCGCGGC TTCTTTCAGA TGGCCCGCAA TGCGGTAGCG CCGTATGCGG ATCGGATGAA GCCGTTTAGT GGCGAGGCCG AGGTGGCGGC GGGCTTCAGC GCCATGCCAT TGCCGGGACA TACGCCGGGG CACAGTGGCT TTATGCTTGA TGCAGGCTCC GAGCAGCTCT TGTTCTGGGG CGATGTGGTT CATAGCACCG CGCTTCAGTT CCGCAATCCT GACTGGACCA TCCCCTTTGA TGCGGATCAG TCGCTGGCGG CCCAGACCCG CAAAGCGATG TTCGACCGCG CAGTTGCTGA TCAGTTGCTG GTGACGGGCA TGCATCTGGA TTTCCCCGGA CTCGGACGGG TCGAACGCGA CGGCGGGGCC TACGCCTTTG ACCAGGCGCC CTGGCAATTC GGCCTCTGA
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Protein sequence | MTLSRRTLLK SVGLAGAGLA VPSLGQMALA APMAPAPVLH QFRLGDAVIT ALLDGHLSLP SGMFTGADPE TVAQTLAGTF YREDAQGLEI PVNGYLVERA GQYTLIDTGT AALMGPELGG LMGALAATGV TPDQISTILL THMHPDHAGG LLNADGSAAF PNAELVVADA EWGFWHDDAI MASVDEGSRG FFQMARNAVA PYADRMKPFS GEAEVAAGFS AMPLPGHTPG HSGFMLDAGS EQLLFWGDVV HSTALQFRNP DWTIPFDADQ SLAAQTRKAM FDRAVADQLL VTGMHLDFPG LGRVERDGGA YAFDQAPWQF GL
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