| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1385 |
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| Symbol | rplM |
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| ID | 4075878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1479554 |
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| End bp | 1480012 |
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| Gene Length | 459 bp |
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| Protein Length | 152 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638006695 |
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| Product | 50S ribosomal protein L13 |
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| Protein accession | YP_613380 |
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| Protein GI | 99081226 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0102] Ribosomal protein L13 |
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| TIGRFAM ID | [TIGR01066] ribosomal protein L13, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAACCT TCTCTGCTAC TCCGGCAGAC ATCGACAAGA AGTGGATCAT CATCGACGCC
GAGGGCGTGG TGCTGGGCCG TCTGGCGTCG ATCGTTGCCA CCCGCCTGCG CGGCAAGCAT
AAACCGTCGT TCACCCCCCA CATGGACATG GGTGACAACG TAATCGTCAT CAACGCTGAA
AAAATCCAGA TGACCGGTAA GAAGCGCGAA GAGAACTTCT ACTGGCACAC TGGCCATCCG
GGCGGCATCA AATCCCGCAC CAAGCAGCAG ATCCTCGAGG GTGCACACCC CGAGCGCGTG
GTCATGCAGG CCGTCAAGCG CATGCTGCCG GGCAACCGCC TGTCCCGTCA GCAGATGACC
AACCTGCGCA TCTATGCTGG TGCCGAGCAC CCGCATGAAG CCCAGAGCCC CGAAGTTCTG
GATGTCAAAT CCATGAACAA GAAAAACACC CGGAGCTAA
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| Protein sequence | MKTFSATPAD IDKKWIIIDA EGVVLGRLAS IVATRLRGKH KPSFTPHMDM GDNVIVINAE
KIQMTGKKRE ENFYWHTGHP GGIKSRTKQQ ILEGAHPERV VMQAVKRMLP GNRLSRQQMT
NLRIYAGAEH PHEAQSPEVL DVKSMNKKNT RS
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