Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1381 |
Symbol | |
ID | 4075874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 1475213 |
End bp | 1476082 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 638006691 |
Product | hypothetical protein |
Protein accession | YP_613376 |
Protein GI | 99081222 |
COG category | [S] Function unknown |
COG ID | [COG2326] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTTTGC CATTTGACGG CGCAATCAGC CAGTATTTCG AGAATGAAGC CCCCAAAGAG GTGCGTAAGG CGATCGAGGA TGCTGGCAAG GATGACATTC TGAGCCCCAG CTACCCTTAT GACGAAGAGC TCTCCAAGGG CGACTACAAG GATCAATACA GGGCGCTGCA GGTCGAGCTG GTCAAGCTTC AAGCGTCGCT CAAGGCGTCT GGTCAGCGCG TCGCGATTGT CTTTGAGGGG CGCGACGCTG CTGGAAAAGG CGGTACAATC AAACGCTTCC GCGAGAACCT GAACCCCCGC GGGGCCCGCG TTGTGGCGCT TGGCAAACCC ACCGAAACCG AGGCAACGCA ATGGTATTTC CAGCGCTACA TCTCTCAGCT GCCGGCGGGC GGAGAGATCG TCTTTTTTGA CCGCAGCTGG TACAATCGCG GAGTCGTCGA GAAGGTTTTT GACTTTTGCA CTGACAGCCA GCGCAGGCAC TTCTTTTCGC AAGTCACTGA CTTTGAAAAG ATGCTGGTCG ACGAAGGGAT CCAACTGTTC AAATTCTGGC TGAATGTGGG GCGTGCCGAA CAATTGCGCC GTTTTCTGGC CCGCGAGAGC GATCCACTCA AACAGTGGAA ACTCAGCTGG ATCGATGTTG AAGGGCTGAA ACGCTGGGAC GCCTATTCAG AGGCAATCCA GGAAACGCTC ACCCTGAGTC ACCGCCCCGA GGCCCCCTGG ACCATCGTGC GCTCTGATGA CAAGAAACGT GCGCGGCTTG AGGCCATCCG GCATGTGCTG CTGTCTGTCG ACTACGCCAA CAAGGATCGC GCTGCGCTCG GCAGCGCTGA CCCGCTGATT TGTGGAGGCC CCGAGATCTG GGATGGCTAA
|
Protein sequence | MTLPFDGAIS QYFENEAPKE VRKAIEDAGK DDILSPSYPY DEELSKGDYK DQYRALQVEL VKLQASLKAS GQRVAIVFEG RDAAGKGGTI KRFRENLNPR GARVVALGKP TETEATQWYF QRYISQLPAG GEIVFFDRSW YNRGVVEKVF DFCTDSQRRH FFSQVTDFEK MLVDEGIQLF KFWLNVGRAE QLRRFLARES DPLKQWKLSW IDVEGLKRWD AYSEAIQETL TLSHRPEAPW TIVRSDDKKR ARLEAIRHVL LSVDYANKDR AALGSADPLI CGGPEIWDG
|
| |