Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1378 |
Symbol | |
ID | 4075871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 1472383 |
End bp | 1473192 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 638006688 |
Product | hypothetical protein |
Protein accession | YP_613373 |
Protein GI | 99081219 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGGGC TTGGAAAAAC CTATATCAGC AACATCCTGC GCCGCTCCGG TCAGTGGTTT CATTACTCTG CCGATTACCG CATCGGGACG CGCTATATGG GCGAATATAT CGCGGACAAT GCCAAGGCGG AGGCGATGAA AGTCCCGTTT CTGCGCGATC TGCTGCTGTC GGATTCGATT GATATTTCCT CCAATATCAC CTTTGAAAAC CTGAGCGCCG TAACCGCCTA TCTCGGGGTG CCGGGTGACG CCCAAAAGGG CGGCCTGCCC ATCGAGGAGT ACCGCACCCG CCAGGACCAG TTCCGCCGCG CCGAAATCGA CGCGCTGCTG GATACGCGCT ATTTCATCGA CCGTTCCGAC CGCATTTACG GCTATCCGCA TTTCATCTGC GATTCCGGGG GCTCGATCTG CGAGTGGGTC GATGCAAATG ACCCCAATGA TCCGCTCTTG AGCGAACTCA GCGCGCATAC GCTTCTGGTC TGGATCAAAG GCACCGAGGA TCACACGCAA GAGCTCATTC GTCGGTTTGA TCGCGCCCCA AAGCCAATGG CCTATCAGCC CGCCTTCCTC ACCCGTGTTT GGGAGGAATA TCTGAATGAA AACAACATCA CAGACGCAGA TGTTGATCCT CATGCCTTCT TGCGCTGGAC CTATGCGCAG GCGCTTGCGC ACCGTCAGCC CCGCTATGAG GCGATGGCCG CACATTGGGG CGTGACGGTC ACGGCAGATC AGGTGGCACA CGTCCAGAAC ACAAGCGATT TCGAGGAGTT GATTGCATCC GCTCTTGAGA CACGAGCGGA ACAGACTTAA
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Protein sequence | MSGLGKTYIS NILRRSGQWF HYSADYRIGT RYMGEYIADN AKAEAMKVPF LRDLLLSDSI DISSNITFEN LSAVTAYLGV PGDAQKGGLP IEEYRTRQDQ FRRAEIDALL DTRYFIDRSD RIYGYPHFIC DSGGSICEWV DANDPNDPLL SELSAHTLLV WIKGTEDHTQ ELIRRFDRAP KPMAYQPAFL TRVWEEYLNE NNITDADVDP HAFLRWTYAQ ALAHRQPRYE AMAAHWGVTV TADQVAHVQN TSDFEELIAS ALETRAEQT
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