Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1255 |
Symbol | |
ID | 4077649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 1352244 |
End bp | 1353467 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638006563 |
Product | acyl-CoA dehydrogenase-like |
Protein accession | YP_613250 |
Protein GI | 99081096 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.229688 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGATG ACAAACCCAC ACTTCGCGCA AAAGATGCAC CTGACCTTGG CCGCTTTGCT TGGGACGACC CGCTGCGCCT GAGCGATCAG CTGACCGAAG ACGAACGCAT GATTGAAGCC TCTGCACGCG CTTACGCACA GGAAAAACTG CAAAGCCGTG TGACTGAGGC CTATGAGACC GAACAGACCG ATCCCGAGAT TTTCCGCGAA ATGGGCGAAA TGGGGCTTCT GGGCACCACG ATCCCAGAGG AATACGGCGG CCTCGGTGGC GGTTATGTCT CCTACGGCCT GGTGGCACGC GAAGTGGAAC GTGTCGACAG CGGCTATCGC TCCATGATGT CGGTGCAAAG CTCGCTGGTG ATGTACCCGA TCTACGCTTA TGGCAGCGAG GAGCAGCGCC AGAAATATCT GCCGAAACTC GCCTCCGGTG AGTGGATCGG TTGTTTTGGT TTGACCGAAC CCGATGCGGG CTCAGATCCG GCCGGCATGA AAACACGCGC CGAAAAGACC GCAGATGGCT ATCGCCTCAC GGGCTCCAAA ATGTGGATTT CGAACGCGCC CATCGCCGAT GTCTTTGTGG TTTGGGCAAA ATCCGAAGCC CACGGCGGCA AGATCCGCGG ATTTGTGCTC GATAAGGGCA CCAAGGGCCT GTCGGCTCCG AAAATTCAAC AGAAGATGTC ACTGCGCGCT TCGATCACGG GTGAGATCGT CCTGGATGGG GTCGAGGTTG GCGAAGAGGC GCTGCTGCCA CATGTCGAAG GACTGAAGGG ACCCTTTGGC TGTTTGAACC GCGCGCGTTA CGGGATCAGC TGGGGTGTCA TGGGGGCGGC GGAAGCCTGC TGGCATGCGG CGCGCCAGTA TGGCCTCGAC CGCCATCAGT TTGGGCGCCC TCTGGCGAAC ACGCAGCTCT TCCAGTTGAA ACTGGCCAAT ATGCAAACCG AGATCGCGTT GGGCCTGCAA GCCTCCTTGC GTGTTGGGCG TCTCATGGAT GAGGCCAATG CCGCGCCGGA GATGATCTCC ATCGTAAAGC GCAACAACTG CGGCAAGGCT CTCGAAATTG CACGGCATGC GCGTGACATG CACGGCGGCA ACGGCATCAG CCTTGAGTTC CAGGTCATTC GTCACATGAT GAACCTTGAG ACCGTGAACA CCTACGAAGG CACGCATGAC GTCCATGCCC TGATCCTTGG GCGCGCGCAG ACCGGCCTGC AGGCGTTCTT CTAA
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Protein sequence | MLDDKPTLRA KDAPDLGRFA WDDPLRLSDQ LTEDERMIEA SARAYAQEKL QSRVTEAYET EQTDPEIFRE MGEMGLLGTT IPEEYGGLGG GYVSYGLVAR EVERVDSGYR SMMSVQSSLV MYPIYAYGSE EQRQKYLPKL ASGEWIGCFG LTEPDAGSDP AGMKTRAEKT ADGYRLTGSK MWISNAPIAD VFVVWAKSEA HGGKIRGFVL DKGTKGLSAP KIQQKMSLRA SITGEIVLDG VEVGEEALLP HVEGLKGPFG CLNRARYGIS WGVMGAAEAC WHAARQYGLD RHQFGRPLAN TQLFQLKLAN MQTEIALGLQ ASLRVGRLMD EANAAPEMIS IVKRNNCGKA LEIARHARDM HGGNGISLEF QVIRHMMNLE TVNTYEGTHD VHALILGRAQ TGLQAFF
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