| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1160 |
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| Symbol | |
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| ID | 4075946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1250605 |
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| End bp | 1250919 |
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| Gene Length | 315 bp |
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| Protein Length | 104 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638006465 |
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| Product | cupin 2, barrel |
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| Protein accession | YP_613155 |
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| Protein GI | 99081001 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.677962 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00806774 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAACTGA TTTCACCGCT TGAGTTTACC GGCACGCGTG CATGGGATGC GCTTGATATT
GAACGATTTA CCGGTGCCAC CACGGTCCGG TTGCATTGGA CGGATCAAGC CTATGTCTGG
CATGTCAACG ACGGGGCCGA GGTCTTTGTC GTGCTCAAGG GTGCGGTCGA TATGCATGTG
CGCCAGACCG GTCGGGAGGA GGTCTTCTCG CTGTCGGAGG GGGATATCTT TCACGCCGAG
GCCGGGGACG AGCATGTGGC GCATCCGCGG GGTGCGGCGC GTGTCCTCGT GATCGAAGCT
GAGGGCAGCA TCTGA
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| Protein sequence | MKLISPLEFT GTRAWDALDI ERFTGATTVR LHWTDQAYVW HVNDGAEVFV VLKGAVDMHV
RQTGREEVFS LSEGDIFHAE AGDEHVAHPR GAARVLVIEA EGSI
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