Gene TM1040_1076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1076 
Symbol 
ID4076309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1151953 
End bp1152252 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content63% 
IMG OID638006380 
Producthypothetical protein 
Protein accessionYP_613071 
Protein GI99080917 
COG category[S] Function unknown 
COG ID[COG5470] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.262747 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.355591 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCCT ATATCATCGG CCAGTTGCAG ATTCAGTCGC GGGACTGGAT GGAGGAATAC 
TATGCCAAGG TGCCGCAGGT GCTCGAAGCG CATGGCGGGC GTTTTTTGGT CCGAGGGGGA
GACCCGGCGC GCATGGAGGG CATGGATCCG ACGCCGGATG CGGCTGTGGT TCTGGAGTTC
CCCGACCGCG CCCATGCAGA GGCGTTCTGG AATTCGGATG CGTTTCAAGC GCTTGCGCAG
CTGCGCCGGA CTGGCTCCTC GCTGAACGCG ATCCTGGTGG ATAAGCTCCC CGACGCCTGA
 
Protein sequence
MTAYIIGQLQ IQSRDWMEEY YAKVPQVLEA HGGRFLVRGG DPARMEGMDP TPDAAVVLEF 
PDRAHAEAFW NSDAFQALAQ LRRTGSSLNA ILVDKLPDA