| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1024 |
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| Symbol | |
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| ID | 4078536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1095376 |
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| End bp | 1096962 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638006328 |
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| Product | YjeF-related protein-like |
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| Protein accession | YP_613019 |
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| Protein GI | 99080865 |
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| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
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| COG ID | [COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase |
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| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGAGG TTGTGACCGC GCAGCAGATG CGCGCGCTGG AGCAGGCGGC AATTGCGAGC
GGGGCTGTGA CGGGTTGCGA GCTTATGGAA TGCGCGGGCA ACGCGGTTGT GGCGGCGATT
CTTGAGCACT GGCCGGAGTT TGCCGGTCGG GCTGACGGGG GCGCTGCCCC CCGGCCTGCG
GCCGTCCCCC GGGATATTTC TGAAAAGCTG AAGCGCGCCG TGGTGCTTTG CGGGCCGGGC
AACAATGGCG GTGACGGCTT TGTGGTGGCG CGGCTGCTGA AGCTCCGGGG CTGGGCGGTG
GAGGTTTTTT TCTACGGGGA TGCGGCGAAA CTGCCAGCAG ATGCCAAGGT GAATTACCAG
CGCTGGTGCG CGCTTGGTGA CGTGCATCGC CTTGATGCGG CAACGCTTGC GTCAGGGACC
AAGGTGCAGC ACGCGGATCT GGTTGTGGAT GCGCTTTTTG GGACGGGGTT GACGCGTCCA
GTGGATTTGC CGCTGGGAGT GATCTGTGAG GTCGCACGGA ATGTGGTGGC GATTGATGTG
CCCTCGGGGC TTTGCAGTGA CAGCGGGCGT GTGATCGGGG CGGCTGCGGT GCAGGCGGAT
CTGACGGTCA CCTTTCATGC ACAGAAGCTG GGGCATGTGT TGGCGGAAGG GCCGCAGCAC
TGCGGGACGG TGAGGGTGGC CTCGATCGGG TTGGAGGGCC ATGAGCTGCC CGTCGCAGCG
GTGCCCACAG TATCTTTTGA TGCACCGGAT CACGCGGACC TCGCGAAGGG GTCTGGCGCG
CATAAGTTTT CCTATGGCCA TGCGCTGATC TTGTCTGGCG GAGCGGGACA GACGGGGGCG
GCGCGGTTGG CGGCGCGCGG GGCGCTTCGG ATCGGCGCGG GATTGGTGAC GCTGGGTGTG
TCCCCTGCCG CGCAGATGGA GGTGGCAGGC CATGTCACCG CCGTGATGCT GCGCCGCGTC
GAGGGAGCGG ACGGGTTGGA GGCTGTTCTG CAGGATGCGC GGATCAATGC GCTCTGTCTC
GGGCCGGGGC TGGGGCATGA GCGGGCGCGG GCGCTTGTGC CGGTGGCGCT GGCGGCAGGG
CGGGCAACGG TTCTGGATGC AGATGCGCTC TCAGCCTACT CTGACGCGCC GGATGCGCTG
TTCGACCAGC TGCACAAAAA CTGCGTTCTG ACCCCACATG GGGGAGAGTT TGCGCGGCTG
TTTCCGGATC TTGCGCAGCG GCTCGCAGAG CCCGCAACGC GCGGACCCGC CTATTCCAAG
GTGGACGCCA CCCGCGACGC CGCAGCGCGC GCGGGTTGCA CCATCCTGTT CAAAGGGGCC
GATACAGTGA TTGCAGATGA AGCCGGCGAC TGCGCGATTC ATGACGCCGC TGGCGCGCGC
GCGGCGCCCT GGCTGGCGAC CGCGGGGGCC GGGGACGTGC TTGCTGGGTT TATCACGGGG
CTTCTTGCGC GCGGTCTTGC CGCCCATGAT GGGGCCACAA CGGGGGCCTG GTTACATGCC
GACTGCGCGC GGCAGTTTGG TCCGGGGCTG ATCGCAGAGG ATTTGCCTGA GCAACTGCCC
CATGTGTTTC GCAAGTTGGG GCTCTAG
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| Protein sequence | MVEVVTAQQM RALEQAAIAS GAVTGCELME CAGNAVVAAI LEHWPEFAGR ADGGAAPRPA
AVPRDISEKL KRAVVLCGPG NNGGDGFVVA RLLKLRGWAV EVFFYGDAAK LPADAKVNYQ
RWCALGDVHR LDAATLASGT KVQHADLVVD ALFGTGLTRP VDLPLGVICE VARNVVAIDV
PSGLCSDSGR VIGAAAVQAD LTVTFHAQKL GHVLAEGPQH CGTVRVASIG LEGHELPVAA
VPTVSFDAPD HADLAKGSGA HKFSYGHALI LSGGAGQTGA ARLAARGALR IGAGLVTLGV
SPAAQMEVAG HVTAVMLRRV EGADGLEAVL QDARINALCL GPGLGHERAR ALVPVALAAG
RATVLDADAL SAYSDAPDAL FDQLHKNCVL TPHGGEFARL FPDLAQRLAE PATRGPAYSK
VDATRDAAAR AGCTILFKGA DTVIADEAGD CAIHDAAGAR AAPWLATAGA GDVLAGFITG
LLARGLAAHD GATTGAWLHA DCARQFGPGL IAEDLPEQLP HVFRKLGL
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