| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1011 |
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| Symbol | |
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| ID | 4078231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1082157 |
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| End bp | 1083461 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638006315 |
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| Product | adenylosuccinate lyase |
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| Protein accession | YP_613006 |
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| Protein GI | 99080852 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0015] Adenylosuccinate lyase |
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| TIGRFAM ID | [TIGR00928] adenylosuccinate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCCCC GCTACGCCCG CCCCGATATG GTTGCCGTCT GGTCTCCCGA GACCAAGTTC
CGCATCTGGT ACGAAATCGA GGCGCACGCC TGCGACGCCA TGGCAAACCT CGGCGTGATC
CCGCGCGAGA ATGCCGAAGC GGTCTGGAAA GCCAAAGATG TCGAGTTTGA CGTCGCCCGC
ATCGACGAGA TCGAAGCCGT AACCAAACAT GACGTCATCG CCTTTCTGAC CCATCTGGCC
GAGCATGTCG GATCGGAAGA AGCGCGCTTT GTGCATCAGG GCATGACCTC TTCGGATGTG
CTTGATACCT GTTTCAACGT GCAGCTGACG CGCGCTGCGG ACCTGTTGAT GGTCGGCATG
GACAAGCTCC TGGACGCGCT CAAAAAACGC GCGCTGGAAC ACAAAGACAC CGTGCGCGTT
GGCCGCAGCC ACGGCATCCA CGCCGAGCCC ACCACCATGG GCCTGACCTT TGCGCGCTTC
TACGCCGAGA TGGACCGCAA CAAGAAACGC CTGATCGCCG CACGCGAGGA AATCGCCACC
GGTGCGATCT CTGGCGCCGT GGGCACCTTT GCCAATATCG ACCCACGCGT CGAAGAACAT
GTCTGCGAAC AGCTGGGCCT CAACCCGGAG CCGATTTCCA CGCAGGTGAT CCCCCGCGAC
CGCCACGCCA TGTTCTTTGC CACCCTCGGC GTGATTGCCT CCTCTATCGA GAACATCGCG
GTTGAGATCC GCCACATGCA GCGCACCGAG GTGCTGGAAG GTGCGGAATT CTTCTCCATG
GGCCAGAAAG GCTCCTCGGC GATGCCGCAC AAGAAAAACC CGGTCCTGAC CGAGAATCTC
ACCGGTCTTG CGCGTCTGGT GCGCATGTCG GTGATCCCGG CGATGGAGAA CGTGGCGCTT
TGGCACGAGC GTGACATCTC GCACTCCTCG GTGGAGCGTG GCATCGGCCC CGACGCCACC
GTGACGCTCG ATTTTGCGCT GCACCGTCTG GCGGGCGTGA TCGACAAGAT GCTGGTGTTC
CCGGAAAACA TGCTTGAGAA CATGAACAAG TTCCCCGGCC TCGTGATGTC CCAGCGCGTT
CTGCTGGCGC TCACCCAGGC GGGTGTGAGC CGCGAGGACG CCTATTCCAT GGTCCAGCGC
AACGCGCTCA AGGTCTGGGA AGAGCGCCTT GATTTCCGCG AGCTGCTGCT GGCGGATGCC
GAGGTGGTTG CGGCCCTGGG CGAGGACGGC ATCAACGAGA AATTCGACAT GGGCTATCAC
ACCAAACATG TCGACACGAT CTTCAAGCGG GTGTTTGGCG AATAA
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| Protein sequence | MIPRYARPDM VAVWSPETKF RIWYEIEAHA CDAMANLGVI PRENAEAVWK AKDVEFDVAR
IDEIEAVTKH DVIAFLTHLA EHVGSEEARF VHQGMTSSDV LDTCFNVQLT RAADLLMVGM
DKLLDALKKR ALEHKDTVRV GRSHGIHAEP TTMGLTFARF YAEMDRNKKR LIAAREEIAT
GAISGAVGTF ANIDPRVEEH VCEQLGLNPE PISTQVIPRD RHAMFFATLG VIASSIENIA
VEIRHMQRTE VLEGAEFFSM GQKGSSAMPH KKNPVLTENL TGLARLVRMS VIPAMENVAL
WHERDISHSS VERGIGPDAT VTLDFALHRL AGVIDKMLVF PENMLENMNK FPGLVMSQRV
LLALTQAGVS REDAYSMVQR NALKVWEERL DFRELLLADA EVVAALGEDG INEKFDMGYH
TKHVDTIFKR VFGE
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