| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0987 |
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| Symbol | |
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| ID | 4078149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1054875 |
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| End bp | 1058678 |
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| Gene Length | 3804 bp |
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| Protein Length | 1267 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638006291 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_612982 |
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| Protein GI | 99080828 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.869665 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.972102 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGGTC TTGTTAACTG GGCCGCAGAT CGGGCGAGGA TGGTCCTCGC CTTCATCGCG
ATCTCGCTGC TGGTCGGCGG ATTTGCCTAT GTGAGCCTGC CCAAAGAGGG CGAGCCCGAC
ATCGAAATCC CTGCCCTCTT CATCTCCGTG CCATTCCCCG GCATCTCTGC CGAGGACTCT
GAAACACTCC TGGTGAAGGT GATGGAGACC GAGCTTGCCG ATCTTGACGG GCTCGACAAA
ATGTCTGCCA CCGCAGCCGA AGGCTATGCG GGCGTGGCGC TGGAGTTCGA CTTCGGCTGG
GACAAGACAG CCGTCATGGC CGATGTGCGC GACGCGATGG ACTCGGCCGA GGCGGAATTC
CCCGAAGGCG CCGAGAAATA CGCGATCCAC GAGATCAACT TTTCTGAATT TCCCATCGTC
ATCGTGAACA TGTCCGGCCC GGTGCCAGAA CGCACCATGG CGCGGCTCGC CAAGGATCTG
CAGGACGACC TCGAGGCGCT GGATTCGGTG CTTGAGGCCG GGATCGCAGG CAACCGCGAC
GAGATGGTCG AGGTGCTGAT CGACCCCCTG CGCCTGGAGT CCTACAACGT CACCGCCGTT
GAACTCATCA ATGTTGTGCA GAACAACAAC CAGTTGATTG CCGCCGGCGA GGTCGAGAGC
GATCAGGGCA CGTTCTCGGT CAAGATCCCC TCCTCCTTTG ACAGTGTCGA GGACATTTAC
GGCCTGCCTG TCAAGACCAA TGGCGACCGG GTCGTGACCC TGGGCGAGCT TGCCGAGATC
AACTTTACCT TCGAGGATCG CCAGGGCACC GCACGGTTCA ACGGCGCCGA TACATTTGCC
CTGCAGGTGG TGAAACGCAA AGGGTTCAAC CTCATCGACA CCGTGGACCA GGTGAAGGCG
ACGCTTGAAA AATCGCAGGC AAAATGGCCG CCCGAACTGC AGGCCGCCGT GACCCTTGGC
ACCTCCAACG ACCAGAGCCG CGTGGTCGGC TCGATGGTGA GCCAGCTTGA AGGCTCGGTT
CTGACGGCGG TGGCGCTGGT GATGATCGTG GTGCTGTCCG CCCTGGGCAG CCGCGCGGCA
CTGCTTGTGG GCTTTGCAAT CCCCACTTCG TTCCTCTTGT GCTTTGCCTT CCTTGCCGTC
ATGGGGATTT CGGTCTCCAA CATCGTGATG TTCGGCCTGA TCCTTGCGGT CGGGATGCTT
GTGGACGGCG CCATCGTCGT GGTGGAATAC GCCGACAAAC GCATCGCCGA AGGCTCCGGC
CCGATGCACG CCTATGTAGA GGCAGCGCAG CGCATGTTCT GGCCGGTGGT ATCCTCGACC
GCAACAACGC TCTGCGCCTT CCTGCCGATG CTGTTCTGGC CCGGCGTACC GGGCGAGTTC
ATGGGCATGC TGCCGGTGAC GCTGATCTTT GTTCTTTCGG CTTCGCTCGT GGTGGCGCTG
ATCTATCTGC CCGTGATGGG CGGTGTCACA GGCCGTCTGA GCCGTGCTTT TGGTGTGGCC
TCTGACGCCC TGCGCCGCAC GCTGCCCTGG GTGGTCCGTG TCGCACTGGT GCCGGTGTCG
CTCTGGGGCA TGTTTGCCGG TGCGATGCAG CTCTTGAACC CCGGCTACCT GATTGACGCC
GGCGAGAGCA TCTGGGCCAC GTTTCTTGGG GCGCTTATCT TCATTCTTTT TGCGGTTGCG
GCCTCCATCA CGCTTGGCGC AGCAGAACTG CAACGGCGTC AGCGCCGCGT GGTCGCAGGC
CAGCGCCTTG GTGGATTTGG CTGGGTCATC AAGATGATCG TCGGCAACCC GGTGATGCCG
ATCGTGACGC TTGTCGTTGT CGGGTTTGGC ATCGTTACGG TCTTTGGCCT CTTTCAGACC
AACAACCACG GCGTCGAGTT CTTTGTCGAA AGCGAACCCG AGCAGGCCAC AGCCTATGTG
CGCGCACGCG GCAATATCTC TCTGCGCGAA AAAGACGAGA TGGTGCGTGC CACCGAGACC
TTGATCATGC AGCACCCCGC TGTGATCAAC GTGTTCTCCT TTGCCGGCGA AGGCGGGCTC
AACACAGATG CATCGGGCGC CAGCACACCG CCCGACACCA TTGGCCAGGT CCAGTTCGAG
ATCATCCCGT GGGAAGACCG CCCCACCCAA TCCGAGCCGA TACTTGGTGG ACTGTTTGAA
CGCGAAGTCA CGGCAGATGC CTTTGACGGC AACACGGTTC TGGACGAGTT GACACAACTC
ACCGACACGC TTCCGGGCTT TGAGGTGGAG ATCAAGGCGC TTGAGGGCGG ACCGGCATCG
GGCAAACCCC TGCACCTGCG CATCAAGGGC GACGAGTGGG AGCCACTGCG CGCCGCAACA
GAAATGGCGC GCGAAAAATT CGAAACCACG CCCGGGCTCA CGCTGATCGA AGACAGCCTG
CCCCTGCCGG GCATCGATTG GGAAATCGAC GTCGATGTGG CCAAGGCCGG ACGCTACGGC
GCCGACGTGG CCACCGTGGG CGCGATGGTG CAGCTGGTGA CCCGCGGCAT CCTCCTTGAT
ACCATGCGCG TCGACAGCTC GGACGAGGAA ATCGAAATCC GTCTGCGCCT TCCCGATGAG
CAGCGCGTTC TGTCGACGCT CGACACGTTG AAGCTGCGCA CCGAGGAAGG CCTGGTGCCA
CTCTCCAACT TTGTGACCCG CAAGCCGGTG CCCAAACTCG CCGAAATCTC GCGCGTCGAG
CAGCAGCGCT ACTATGACGT GAAGGCAGAT GTTGAACCCG GGCTGAGCCG TGTCCTCACC
GAGGACGACA GTGGCGAGAC GGTCTCGTTG GCTGTTGTTA AGGCGATCCC AGAAGGGATT
GCGCCCTCCG GCGAGACGGT CACCCTACCG AGTGGCGCTC TGGTCGAAGT AAAGACCCTC
ACCGGTGTCG GCTCTGTTGC CGAGCTCAAT GAGGCCCTAT CGAGCGGCAG CACGCAGACC
GTCGCGATCA ATGCCAACGA GCGGATCGCG GAACTGACCA CCTGGTTGGA AAGCTCTCCG
TTTGACGCCT CGATCGACTG GGAATGGACC GGTGACCAGG AAGAACAGGC CGAATCCGGT
GCCTTCCTGA TGAAAGCCTT TGCGGGCGCG CTGGGTTTGA TGTTTGTGAT CCTGCTGGCG
CAGTTCAACA GCTTCTACAA CTCGATACTG GTGCTTCTGG CGGTGGTCCT GTCCACCACG
GGCGTATTGA TCGGAATGAT GGTCATGGAG CAGCCCTTCT CCATCATCAT GACCGGGACC
GGCATCGTGG CGCTGGCTGG GATCGTTGTG AACAACAACA TTGTTCTCAT CGATACCTAC
CAGGAGTTCA GCCAGCACAT GCCGCGCCTT GAGGCGATCA TTCGCACCGC CGAGGCGCGC
ATCCGTCCGG TGCTGCTGAC CACGATCACA ACCATGGCGG GCCTTGCCCC GATGATGTTT
GGCGTGAGTC TCGACTTCGT CAACGGCGGC TACTCCATCG ACAGCCCGAC CGCGCTCTGG
TGGAAACAGC TGGCCACTGC GGTTGTGTTC GGCCTCGGCG TGGCGACAGT TCTGACGCTG
GTGGTTACGC CCTCGTTGCT GGCGATCCGT GTTTGGTTCT GGACCTATGT GGTGGCCCTG
CTGCGCCTGC TGGCCCGCGT GACGGGAGGT CGCGGCAGCC AGATCGCACG GGATATGGAG
CTTGCCAAGA AAGCACGGCG ACTGCCCTCG ACAGAGGTGG ACTGGACCGC GCCAGACTGG
CCGGACAGCA CGAAGCCGCC CGCGCAAAAG GGCACGACAG AGCCGCCGCG CATCGGCCCA
AAGCCCCTTG AGGCAGCCGA ATAG
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| Protein sequence | MIGLVNWAAD RARMVLAFIA ISLLVGGFAY VSLPKEGEPD IEIPALFISV PFPGISAEDS
ETLLVKVMET ELADLDGLDK MSATAAEGYA GVALEFDFGW DKTAVMADVR DAMDSAEAEF
PEGAEKYAIH EINFSEFPIV IVNMSGPVPE RTMARLAKDL QDDLEALDSV LEAGIAGNRD
EMVEVLIDPL RLESYNVTAV ELINVVQNNN QLIAAGEVES DQGTFSVKIP SSFDSVEDIY
GLPVKTNGDR VVTLGELAEI NFTFEDRQGT ARFNGADTFA LQVVKRKGFN LIDTVDQVKA
TLEKSQAKWP PELQAAVTLG TSNDQSRVVG SMVSQLEGSV LTAVALVMIV VLSALGSRAA
LLVGFAIPTS FLLCFAFLAV MGISVSNIVM FGLILAVGML VDGAIVVVEY ADKRIAEGSG
PMHAYVEAAQ RMFWPVVSST ATTLCAFLPM LFWPGVPGEF MGMLPVTLIF VLSASLVVAL
IYLPVMGGVT GRLSRAFGVA SDALRRTLPW VVRVALVPVS LWGMFAGAMQ LLNPGYLIDA
GESIWATFLG ALIFILFAVA ASITLGAAEL QRRQRRVVAG QRLGGFGWVI KMIVGNPVMP
IVTLVVVGFG IVTVFGLFQT NNHGVEFFVE SEPEQATAYV RARGNISLRE KDEMVRATET
LIMQHPAVIN VFSFAGEGGL NTDASGASTP PDTIGQVQFE IIPWEDRPTQ SEPILGGLFE
REVTADAFDG NTVLDELTQL TDTLPGFEVE IKALEGGPAS GKPLHLRIKG DEWEPLRAAT
EMAREKFETT PGLTLIEDSL PLPGIDWEID VDVAKAGRYG ADVATVGAMV QLVTRGILLD
TMRVDSSDEE IEIRLRLPDE QRVLSTLDTL KLRTEEGLVP LSNFVTRKPV PKLAEISRVE
QQRYYDVKAD VEPGLSRVLT EDDSGETVSL AVVKAIPEGI APSGETVTLP SGALVEVKTL
TGVGSVAELN EALSSGSTQT VAINANERIA ELTTWLESSP FDASIDWEWT GDQEEQAESG
AFLMKAFAGA LGLMFVILLA QFNSFYNSIL VLLAVVLSTT GVLIGMMVME QPFSIIMTGT
GIVALAGIVV NNNIVLIDTY QEFSQHMPRL EAIIRTAEAR IRPVLLTTIT TMAGLAPMMF
GVSLDFVNGG YSIDSPTALW WKQLATAVVF GLGVATVLTL VVTPSLLAIR VWFWTYVVAL
LRLLARVTGG RGSQIARDME LAKKARRLPS TEVDWTAPDW PDSTKPPAQK GTTEPPRIGP
KPLEAAE
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