Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0951 |
Symbol | |
ID | 4077345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 1015957 |
End bp | 1016421 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638006254 |
Product | DNA polymerase III subunit chi |
Protein accession | YP_612946 |
Protein GI | 99080792 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2927] DNA polymerase III, chi subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0162676 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGGCCG CCTACTTCTA CCATCTGACG CGCAAGCCCT TGCAGGAAAC GCTTCCCGTG CTTCTTGACA AGGCGCGCGG CGCGGGCTGG CGAATTGCCG TGCGCGGCCG CGATCCCGAG CGGCTGGCGT GGCTCGATGA TACGCTTTGG CTTGCGGGGG ATGCGTCCTT TCTGCCCCAC GGCATTGCAG GCGGCCCTCA TGATGCGCTG CAACCGATCC TGCTCACCAC TGCGTCGGAG GCTGCTAATG GCGCCGATTG CGTGATGTCC GTGGATGGTG CTGAGGTGCA GCCAGACGAG GTGGACGCGC TGGAGCGGGT CTGCATCCTC TTTGATGGCA CAGACCCCGA GGCCGTGCAG CATGCGCGCG GGCAATGGAA AAACCTCACT GCGGCAGGTT GCTTGGCACA GTATTGGTCC GAGGAAAGCG GTCGCTGGGA AAAAAAGGCT GAAAGCGGAG GCTGA
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Protein sequence | MGAAYFYHLT RKPLQETLPV LLDKARGAGW RIAVRGRDPE RLAWLDDTLW LAGDASFLPH GIAGGPHDAL QPILLTTASE AANGADCVMS VDGAEVQPDE VDALERVCIL FDGTDPEAVQ HARGQWKNLT AAGCLAQYWS EESGRWEKKA ESGG
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