| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0927 |
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| Symbol | |
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| ID | 4077555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 989796 |
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| End bp | 991133 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638006230 |
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| Product | DEAD/DEAH box helicase-like |
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| Protein accession | YP_612922 |
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| Protein GI | 99080768 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.220122 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAT TCTCCTCTAT GGACCTTCCC AAGCACCTGC ACACCCGCAT GGAAGCGATG
GGGTTCAATA CACCCACCCC GATTCAGGCG CGCGCCATTC CCCATGCGCT GAATGGTCAG
GACGTGTTGG GCCTGGCCCA GACCGGCACC GGCAAGACCG CGGCCTTTGG CGTGCCGCTG
GTGGCGCAGA TGCTCGAATA TGGTCGCAAG CCTGCGGCCG GTACAGTGCG CGGCCTGATC
CTCGCTCCGA CCCGCGAGCT GGCCAATCAG ATCGCAGAGA CCCTGCGCGG TCTCACCGAA
GGCAGCCCGC TGAAGACCGG GCTCGTCGTG GGCGGCGTGT CGATCAACCC GCAGATCCAC
CGCCTGTCCA AAGGCACCGA CATTCTGGTG GCCACCCCCG GCCGACTGCT CGACATCCTC
GACCGCAAGG CGCTGGATCT GGGGTCTTGC GACTTTCTTG TTCTTGATGA GGCCGATCAA
ATGCTCGACC TCGGGTTCAT CCACGCCCTG CGCAAGATCG CGGCCCTCCT GCCCGAAGAG
CGCCAGACCA TGCTGTTCTC GGCCACGATG CCCAAGCAGA TGAACGAGAT CGCAAACGCC
TATCTCAAGA GCCCCGTGCG CATCGAAGTG ACCCCTCCGG GCAAACCCGC CGCCAAGGTC
ACACAATCGG TTCATTTCAT CGCCAAGGCG GAAAAGCTGA GCCTTCTCAA AGAGCTGCTC
TCTGCCCATG ATGGCGAGCG CACGCTGGTC TTTGGCCGCA CCAAACATGG CATGGAAAAG
CTGATGAAGG TGCTGGACAA GGCAGGCTTC AAGGCAGCGG CGATCCACGG CAACAAGAGC
CAGGGCCAGC GCGAGCGCGC GCTGAAAGCG TTCAAATCGG GCGAAATCAC CGTGCTTGTG
GCCACCGATG TGGCCGCGCG CGGGCTTGAT ATTCCCGATG TGAAATACGT CTACAACTAC
GAGCTGCCCA ATGTGCCGGA TGCCTATGTG CACCGCATCG GTCGCACCGC ACGTGCAGGC
AAAGACGGTC AGGCCGTCGC CTTCTGTGCG CCGGATGAGA TTGGCGATCT GAAGGCGATC
CAGAAAACCA TGGGCATCAC CATCCCCGTG GCCTCTGGTC GCGCCTGGGA AGAGCTGCCG
GACCCCGCAG CCAAACCCGC ACGCGGTGGC GGACGCGGTC GCCCCGGCGG CGGCGGCGGT
GGCCGTGGCA AAGGCGGTGG CAAGCCTGGC GGCGGTCGTC GTCGCTTTGG CGGTGGCAAA
TCCGCAGCCC CCTCGGGGGG CGCAGGCGAA TCCCGTGGTG CCGCTGGTGC GGGTGGACGG
CAGCGGCGCA AGTCCTGA
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| Protein sequence | MTEFSSMDLP KHLHTRMEAM GFNTPTPIQA RAIPHALNGQ DVLGLAQTGT GKTAAFGVPL
VAQMLEYGRK PAAGTVRGLI LAPTRELANQ IAETLRGLTE GSPLKTGLVV GGVSINPQIH
RLSKGTDILV ATPGRLLDIL DRKALDLGSC DFLVLDEADQ MLDLGFIHAL RKIAALLPEE
RQTMLFSATM PKQMNEIANA YLKSPVRIEV TPPGKPAAKV TQSVHFIAKA EKLSLLKELL
SAHDGERTLV FGRTKHGMEK LMKVLDKAGF KAAAIHGNKS QGQRERALKA FKSGEITVLV
ATDVAARGLD IPDVKYVYNY ELPNVPDAYV HRIGRTARAG KDGQAVAFCA PDEIGDLKAI
QKTMGITIPV ASGRAWEELP DPAAKPARGG GRGRPGGGGG GRGKGGGKPG GGRRRFGGGK
SAAPSGGAGE SRGAAGAGGR QRRKS
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