Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0912 |
Symbol | |
ID | 4076282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 973041 |
End bp | 975563 |
Gene Length | 2523 bp |
Protein Length | 840 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638006215 |
Product | MerR family transcriptional regulator |
Protein accession | YP_612907 |
Protein GI | 99080753 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAAGA CCGATGCGCC GCAGCCAATA AAGGGTCGCC CCATGTCCAA GTCCCCTGAC GCCTTTCGCA CCATCAGCGA GGTAGCAGAA TGGCTGGATG TACCGGCGCA TGTGCTGCGG TTCTGGGAAA GTAAGTTCAC GCAGGTCAAA CCCGTCAAAC GCGCCGGTGG ACGGCGCTAC TATCGCCCAA CGGATATGTT GCTTCTGGGC GGTATTCAGC ACCTCCTGCA CGAAGAAGGT CTGTCGATCA AAGAGGCACA AGCCCTGTTG CGCGAAGAGG GCATCCAGCA TGTGCAGTCG CTCTCCAAGC CGCTCGACGG CGACCAAGAG GACGAATCAG CGATTGAGGC CAAACCAGCG AGCAAATGGG TTGAGCCATC TGAGGTCGAA AAGCCCAAGG CCCCGCTGGT AGACCGCGAT CCCCCCGGCG CCGAAGAGCA ATCGGAGCGC AAAGCGGCTC CGCCACCGCC ACCGCCCTAC CCCGCAACCC CGCCCGCGCC GACCGCTCCC GTGACGCCTG CAGCGGCTAC GCCCCCCGTT GCGCCGGGCG ACAGCATGGC CCCGCCTCAG GGCCAGACAC CCGCAGCCGC CTCTGCAAAT GCATCCAGCG CGGCAACATC TGCCCCGGCG GAGAACGTAG CTTCCTCGGG GCCTGCCGAG AGCCCGGCGT CCACCGAGAC CCCGTCCCAG CCTACGACTC CTCCTGCGGC ATCCCCTTCA CTGGGGGCGG AGGCTGGCGC TGGTCAGGAC GCGGACGCGG CCCCACTGGG CACACCGCCT TCTGTACCGC CTGCCGCGCC GTCGCCTGCG CCCGCTGACG CAGGACCAGC CACGCCGCCC GCGCAAACGC CGCCTGCCGC TCCTGCTTCC TCCGCTGCCC CCTCGGAGGC CGCCGCCGCA TCTTTGCACC AAACACCGAG TGAGTTTGCC CCCACCAGCG ATACTGCGCC AGCCGTGCGC AGCCCTTCCA CACCGGAAGG CGCTGCTGAG GATAGTGCGC CACAGGAAGG CGATCACGCG CGCGCCCATG TGGGCGGCGC GCAGACGCCG CAGACATCCG CAGGTCAAAT GGCGATGCCC ATGGACCTTC CAAATGCCGC CGCACCGCAA CGGGATATGG CCTCACAGGC CCAGGCCGTG CGTGCGGCCA CAACACCTTC CTCTGCCACT GTTGCCCCCT CTTCGGCATC GAATTCCGAC CAGCAGGATT TCTTTGCCGC AGCCGCAGAT GCGCAAAACG CCGGGCAAGC ACCGGCGTCC GACAGCGCAG CTGTTGCCTC CGATCCGCCT GCGCCTAACC CAACTCAGCC CGCCCCGGCG CAGCCTGATC CACTGGCGCA ACAAGAGTCA CAGATGTCCG CGCCGCCTGT CGGGACGCCC CCTGCCGAGG ATCTGGTTGC AGAGGCACCG GTTGCGGATG CACCTGCGGA CGATCTCGCA GGCGATCCCG TCGCGGATCA GGCGGAGACA GTTCACGGAT CTGCAACCGA TGCGGAGTCG ACAGAGGCTG TTTCTAAGGG ATCAACCGCG CCGGTTGCAG ACGCGCGCCC CGCCAACCTT ACGTCTGACC AGATTTCAAC CGAGGTCTCT TTTACAGGAG AAGCACCGCA GCAGATGGCG GCTCAGGCGT CAGCGCCAGA TGCTCTCTTC GCCGGGACGA CGCAAGAACC CGATACGGTT CAAGCATCTG ATTCTGTGAC TGAAACCCCC GAGGCCTTGC AACCCATTGA GGGCAGTGCA GGCGTCGACG AGACGGCGAT CCAATCTCTT GCCTCGGACG ACCCCAGTTC TGAGCCCGCA CTGGACGCGC CCGCATTCGA CTCGCCGGGC TCTCAACACC CGCCCGCCGA CGAACCCGCG CCTGTTCAAC CTGTCTCCGA CGAGCCAGTG TCTTCGGACT TGGCGGCCAT AGAGGAAACA AACGCCGATC CGGCAGCGCA GATGGCCAGC GCCCTGGCAG AGGCCACCGC TCCCGTGGCT GAGACCACCG AATCCGCTCC CTCAGATGTC GACATCACGG GCGCGGACGA TAGCGATGTG TCCGCAGTAG AAGAACCCGC GTCTGAGATG CCTCACGCCG AGGTCGAGGC GTCCGATTCG CATACCGAAA CCTCGGATCA GGATCCCGCC CCCGCATTGG ATGTGACCGA TGCGATGACG GACACCGCAG CCGAGGCCGC ACCAGAGGCA GACCCGCAGT CCGCGCCTGA TGCAGGCCCC TTTGAGGACA ATGCGGAGAC CGCCGAAGAA CGTGACGCCG CTGCCCCGGT CACAGATGAG GCCGAAGACG CCGCAGCCCT GGATCAGTTC CCAGAGACAG AGCGCACACC TTTGGCGGCT GACTCGACGC CCACAGCGGA GTCGCCGCGC CCGCGGGTGA TCGAGGTTTC CGACACCCCT GAGGGCAGCT TTGCCGCCGG ACCTCTTCAG CGCCTCTCGC GCCTCGGTAC ACTGACGGCA GCGCAACAAG GCGCGTTGCG CGAGATTGCA ACCGCTTTGC GCGAGATCGC CTCCCGGCAC TGA
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Protein sequence | MRKTDAPQPI KGRPMSKSPD AFRTISEVAE WLDVPAHVLR FWESKFTQVK PVKRAGGRRY YRPTDMLLLG GIQHLLHEEG LSIKEAQALL REEGIQHVQS LSKPLDGDQE DESAIEAKPA SKWVEPSEVE KPKAPLVDRD PPGAEEQSER KAAPPPPPPY PATPPAPTAP VTPAAATPPV APGDSMAPPQ GQTPAAASAN ASSAATSAPA ENVASSGPAE SPASTETPSQ PTTPPAASPS LGAEAGAGQD ADAAPLGTPP SVPPAAPSPA PADAGPATPP AQTPPAAPAS SAAPSEAAAA SLHQTPSEFA PTSDTAPAVR SPSTPEGAAE DSAPQEGDHA RAHVGGAQTP QTSAGQMAMP MDLPNAAAPQ RDMASQAQAV RAATTPSSAT VAPSSASNSD QQDFFAAAAD AQNAGQAPAS DSAAVASDPP APNPTQPAPA QPDPLAQQES QMSAPPVGTP PAEDLVAEAP VADAPADDLA GDPVADQAET VHGSATDAES TEAVSKGSTA PVADARPANL TSDQISTEVS FTGEAPQQMA AQASAPDALF AGTTQEPDTV QASDSVTETP EALQPIEGSA GVDETAIQSL ASDDPSSEPA LDAPAFDSPG SQHPPADEPA PVQPVSDEPV SSDLAAIEET NADPAAQMAS ALAEATAPVA ETTESAPSDV DITGADDSDV SAVEEPASEM PHAEVEASDS HTETSDQDPA PALDVTDAMT DTAAEAAPEA DPQSAPDAGP FEDNAETAEE RDAAAPVTDE AEDAAALDQF PETERTPLAA DSTPTAESPR PRVIEVSDTP EGSFAAGPLQ RLSRLGTLTA AQQGALREIA TALREIASRH
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