| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0864 |
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| Symbol | |
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| ID | 4076234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 917929 |
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| End bp | 919350 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638006166 |
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| Product | peptidase M48, Ste24p |
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| Protein accession | YP_612859 |
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| Protein GI | 99080705 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0891552 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTTG AGCGCGTATT CTCTCTGGCG TCAATCCCGT GCGCACGTCT GTTTCGTCTT
CTGGCCGCAG CGGTGGGCAG AGGGTGCGGC CGTGGGCCGG TGCTGGCAGC ATGTCTTGCC
GCCGTGCTGG CCTTTGCGCC GATCGCGGCG CAGGCGCAAT CCATTCGCCT TCTGCGCGAC
GCCGATATCG AACACGGGCT GACGGAGCTT GCGCGCCCCA TTCTAACCGC CGCCGGTCTG
AGCCCGCGAC GGGTGCGCAT CCTTGTGGTG AATGACAGCA GTTTCAATGC CTTCGTGATC
GACCACCGGG CGATCTTTAT CAACTACGGT CTGATCCTGA AGGCCGAGAG CCCAGAGATG
CTGCAGGCGC TGATCGCCCA TGAAGCGGCC CATATCGCCA ATGGCCACAT CGGGCGGCGG
GTGCAGAACA TGCGCTCTGC GAGCACGGCC GCAGGCCTTG GGGTTGCGCT CGGGCTGCTG
GCATCGGCCG CAGGGGGCGG CAAGGCAGGC GCGGGCGTGG CCTTTGGGGT GCAATCCTCG
GCGCTGCGCA ATTTCCTGTC GCACACCCGC GCCGAAGAAG CCTCTGCCGA CCGCTCCGCC
ATCGGGTTCA TGACAGCCGC CGGGGTCAAT CCCAAGGGCA TGGTGGAACT GCACAGGATT
TTTGCTGGCC AAGAGGTCCT GAGCACAGGT TCGCAAGATC CTTATATGCG CTCGCACCCG
CTGACACGCG ACCGGATGCG CGCCGCAGAA GCCTATGTGG CCAGCGCGGG CGCCGCGGCG
GCCTCCGACC CTGCCGCCGC CTATTGGCTG GCGCGGGTGC AGGGCAAGCT TTCTGCCTTT
ACGCGCGCGC CAAGCTGGAC CAAGCGACGG GTCGCCTCCG AAGGGTATGC GGATGTCAAA
CGCATGCGTC TTGCGGTGGC GCATCACCGG CAAAACAGTT TCTCCCGCGC GCAAAAGGAA
ATGCAGGCGC TTTTGGCCAC ACGCCCGAAG GACGCCTATT ACCACGAGCT CTGGGGTCAG
ATCCTCTATG AAAACCGCCG CTGGGGCGCT GCAGTCTCGG CCTTTGGCAC AGCCGCCAGC
CTCTCCCCAA ACGAGCCTTT GATCCTCGCA AGCCTCGGGC GCGCGCAGCT GGCAGCGGGC
AATCCCCGCG CCGCCCTCAA GACGATGGAA AAGGCCCGAG GCCTTGATTT TCGCAATGCA
ACCCTCTTGC GCGATATGTC GCTGGCCTAT GCGCAAACCA ATCAGACCGG CATGGCTGCG
CTTGTGACCG CCGAGCGCTA TGCGCTTCAG GGGCGTCTCA AGGATGCAGG ACCACATGCC
AAACGCGCAA CCGGCCTTCT GGCCAAAGGG TCCCCGGCCT GGCGCCGGGC CCAGGATGTT
CTAATTGCCT TTGAACAAGA CGAGAAAAGG AACCAAAAAT GA
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| Protein sequence | MSFERVFSLA SIPCARLFRL LAAAVGRGCG RGPVLAACLA AVLAFAPIAA QAQSIRLLRD
ADIEHGLTEL ARPILTAAGL SPRRVRILVV NDSSFNAFVI DHRAIFINYG LILKAESPEM
LQALIAHEAA HIANGHIGRR VQNMRSASTA AGLGVALGLL ASAAGGGKAG AGVAFGVQSS
ALRNFLSHTR AEEASADRSA IGFMTAAGVN PKGMVELHRI FAGQEVLSTG SQDPYMRSHP
LTRDRMRAAE AYVASAGAAA ASDPAAAYWL ARVQGKLSAF TRAPSWTKRR VASEGYADVK
RMRLAVAHHR QNSFSRAQKE MQALLATRPK DAYYHELWGQ ILYENRRWGA AVSAFGTAAS
LSPNEPLILA SLGRAQLAAG NPRAALKTME KARGLDFRNA TLLRDMSLAY AQTNQTGMAA
LVTAERYALQ GRLKDAGPHA KRATGLLAKG SPAWRRAQDV LIAFEQDEKR NQK
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