| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0834 |
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| Symbol | |
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| ID | 4077540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 878016 |
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| End bp | 879683 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638006132 |
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| Product | amidohydrolase 3 |
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| Protein accession | YP_612829 |
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| Protein GI | 99080675 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.644909 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCC CTCCTCAGAC CGTGATCCTG AACGGTCGCC TGATCACCTT TGACCCCAAA
AGCCCCTTTG CCGAGGCGCT CGCCATCACC GACGGGCTGA TCTCTGCGGT GGGCACCACC
GCCGAAATCC GCGCTCTTTC CGCGCCCTCC ACTCGCGTGA TTGACGCCGC CGGGAGCACC
GTGTTGCCGG GATTTATCGA CAGCCATGTG CATCTCTTTG GCGGCTCAGT CGAACTCGCG
TGCCTGGATC TCACGGGTGT TCAGGGGGAG ACAGAACTGA CCGAGGTCGT GCGCGAATGG
GCCGCCAAGA ACACCGAAGA TCGGCTCGTC TTTGCGGTTC AGGCCGATTA CGCCATTCTG
GGTGAAGGTA TCAAAACCAC CCGTCAGGCG CTGGATCGCG TTTTGCCCGA TCGTCCCTTT
GCCATGTATG CGCCCGATCA TCACACGGTC TGGGCCAATA CCGCCGCGCT GGAGGCCGCA
GGGCTTCTTC ATGGTGCAGA GGTCGAAGCG GGGGCGCAAG TGGTGATGGG CACCGATGGC
CGCGCGACGG GCGAACTGCA GGAGCCTTCC GCCTATGCGC CGGTGCTGCG CATGACCCGC
CACGCAGGTC GGGACATGAT GGGGCTGGTA ACGGGGGCCG ACCCGGTACC AGCAGCCACG
CCCGCCGAAC GCGCGCTAGA CAAGGCAGCT TTGGAACGTG GCCTCAAACA CTGCGCCAGC
CACGGCATCA CCGGGTTGCA CAATATGGAT GGCAATTTCT ATCAGCTCGA ACTGCTCTCC
GAGATGGAGC GGGACGGCAC GCTCTTATGC CGTACCGAAG TACCTTTTCA CTACAAGAGC
CCAGATCCGC TCGACCGGTT TTCCGAAGCG CAAGACATGC GCCAACGCTT CAACAGCGAT
ATGGTCTGGT GCAATCGGGT AAAGATGTTC ATGGATGGCG TTGTTGAGAG CGGCACCGCC
CTGATGCTGC GCCCCTACCC CGGCACCGAT CATATCGGCG ACGCGGTGTT TGAGCCGGAG
CACTTCAACG AAGCCTGCAT CCGCGCCGAC GCCTTGGGGC TGCAGATTGC CACTCATGCG
ATTGGCGATC TGGCCGTGCG CCGCACACTC GATGGCTATG AGGCTGCCCA GCGCAGCAAT
GGCCAACGTG ACAGTCGCCA CCGGATCGAA CACATCGAAG TGCTGCACCC CGACGATCTG
CCCCGTTTCA AGGCCCTGGG CGTCGTCGCC TCGATCCAAC CGGGGCATGC ACCCTTTGGA
GGCTATTTCC CTCCATCGGG CGTGGGGGCA ATGCTGCACC CGGACCAGAT CCCGCTCGCA
TACGCATGGC AGGACATCCG CAACAGCGGC GCAAAGGTCA TTTTCTCGAC CGACTGGCCC
GTAATCCCCG TCGACGTGAT GCCCACGATC AAGGGCGCGG TTGCGCCGCA TTCGCTCGGT
GCCCCGTGGC GAGATCAATC ACAGAGCCTG ATGGATACGC TCGCCAGCTA CACGGTCGAG
AACGCATGGG TGGAATTCAA TGAGGCCCGC AAGGGCATGT TGAAACCGGG TATGATGGCA
GACATCGTGG TGATGGATCA CAACCTTGAA GCCATGGATC CCCAGTTGCT CGATCAGTCC
CGCGCAGCCT TTACGATCTG TGGCGGTCGC CTGACCTGGG AGGCTTGA
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| Protein sequence | MTIPPQTVIL NGRLITFDPK SPFAEALAIT DGLISAVGTT AEIRALSAPS TRVIDAAGST
VLPGFIDSHV HLFGGSVELA CLDLTGVQGE TELTEVVREW AAKNTEDRLV FAVQADYAIL
GEGIKTTRQA LDRVLPDRPF AMYAPDHHTV WANTAALEAA GLLHGAEVEA GAQVVMGTDG
RATGELQEPS AYAPVLRMTR HAGRDMMGLV TGADPVPAAT PAERALDKAA LERGLKHCAS
HGITGLHNMD GNFYQLELLS EMERDGTLLC RTEVPFHYKS PDPLDRFSEA QDMRQRFNSD
MVWCNRVKMF MDGVVESGTA LMLRPYPGTD HIGDAVFEPE HFNEACIRAD ALGLQIATHA
IGDLAVRRTL DGYEAAQRSN GQRDSRHRIE HIEVLHPDDL PRFKALGVVA SIQPGHAPFG
GYFPPSGVGA MLHPDQIPLA YAWQDIRNSG AKVIFSTDWP VIPVDVMPTI KGAVAPHSLG
APWRDQSQSL MDTLASYTVE NAWVEFNEAR KGMLKPGMMA DIVVMDHNLE AMDPQLLDQS
RAAFTICGGR LTWEA
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