| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0763 |
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| Symbol | |
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| ID | 4076172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 818815 |
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| End bp | 820482 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638006060 |
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| Product | beta-lactamase-like |
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| Protein accession | YP_612758 |
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| Protein GI | 99080604 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0595] Predicted hydrolase of the metallo-beta-lactamase superfamily |
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| TIGRFAM ID | [TIGR00649] conserved hypothetical protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.614365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGTG AAAGACTAAT CTATTTGCCC CTCGGCGGGG CAGGCGAAAT CGGCATGAAC
GCCTACGTCT ACGGCTATGG TGCGCCGGGC AAGGAACGGC TGATCCTGGT GGATCTGGGC
GTGGCCTTTC CCGACATGGA CACCACCCCC GGCGTGGACC TGATCATGCC CGACATCAGC
TGGCTGGCGG AACGCGCCGA TCAGCTGGAG GGGATTTTCA TCACCCACGC CCACGAGGAC
CACATCGGTG CAGTGGCGCA TCTCTATAGC CGCCTCAATG TGCCGGTCTA TGCGCGCGCC
TTCACCGCCA ATATCGCCCG TCGCAAGATG GAAGAGCAGG GTCATGACCC CGACTCCGTG
GTGACGATCT CGCCCTGGCC CGAAGTCACA AAGCTCGGCC CCTTCACCAT CGGCGCGGTG
CCGATCTCGC ACTCGATCCC GGAGTCGGGG GGTCTGGTGA TCGACAGCCC CGCAGGCCGG
GTGATCCATA CCGGCGATTT CAAACTGGAC GCCAACCCCA TCGTGGGTGA GGCCTTTGAT
CCCGACCTCT GGGCCGAGAT TTCCAAAGAT GGCGTGCAGG CACTGGTGTG CGATTCCACC
AATGTGTTCT CGCCGCATGC GGGCCGCTCC GAAAGTGAGC TCGGCGACAA TATTACCAAG
CTGATCGCAG AGGCCTCTGG CATGGTGGCG GCAACGACCT TTGCCTCCAA CGTGGCGCGC
GTCAAAACGC TGGCGCAGGC TGGCGAACGG GCTGGGCGCT CGATTGTGCT TTTGGGGCGG
GCCATGCGTC GCATGATCGA AGCCTCGATC GAGACAGGTG TTCTGAGCGA TTTTCCAAAG
GTGATCCAGC CCGAGGAAGC GGCAGATATT CCGCGTGAAA ACCTCATGCT GATCACCACC
GGATCGCAGG GCGAACGTCG CGCCGCGACT GCGCAGCTGG CCCGTGGCAA GTATCGCGGC
ATGGAGCTCA AGGAGGGCGA TCTGTTCCTG TTCTCCTCCA AGACCATTCC CGGCAATGAA
AAAGGTGTGA TCTGGATCAT CAACCAGTTT TCCGAGAAGG GCGTCGATGT GGTGGATGAC
AGCTCTGGTC TCTATCATGT TTCTGGTCAC GCCAACCGTC CTGACCTTGA GCAGATGCAT
GACATCGTGA AGCCCAAGAT CCTGATCCCG ATGCACGGCG AGCACCGCCA CCTGCGCCAG
CACGCGCGCC TCGGCGAAGA AAAGGGGATC GCCTCCGCCA TTGCGGTCAA TGGGATGATG
ATGGATCTCA CCGGCGACGC ACCCAAGGTG GCCGACTACA TCGACACTGG CCGCACCTAT
CTGGATGGTT CGGTCAAGAT CGGTGCCATG GACGGCATCG TGCGCGACCG TATTCGTATG
GCGCTCAATG GTCATGTGGT GATCACGGCC ATTCTTGATG AAGAGGATGA ACCGCTGGGC
GAACCCTGGG TGGACCTCAA GGGCCTCGCC GAGACCGGTC AGTCCAATGC CGCGCTCGCC
GAGATCATGG AAGAGGATCT GAACCAATTC CTGATGCGCG CGGGCAAGAA GACCCTCAAG
GATGACGACA AGCTGGAGCA GGAACTGAAG CGCATTGCGC GTCAGACGTC GCAATCCGAG
ATCGGCAAGA AACCTGAGGT GACCGTGATC GTCAGCCGGA TGCGCTGA
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| Protein sequence | MSSERLIYLP LGGAGEIGMN AYVYGYGAPG KERLILVDLG VAFPDMDTTP GVDLIMPDIS
WLAERADQLE GIFITHAHED HIGAVAHLYS RLNVPVYARA FTANIARRKM EEQGHDPDSV
VTISPWPEVT KLGPFTIGAV PISHSIPESG GLVIDSPAGR VIHTGDFKLD ANPIVGEAFD
PDLWAEISKD GVQALVCDST NVFSPHAGRS ESELGDNITK LIAEASGMVA ATTFASNVAR
VKTLAQAGER AGRSIVLLGR AMRRMIEASI ETGVLSDFPK VIQPEEAADI PRENLMLITT
GSQGERRAAT AQLARGKYRG MELKEGDLFL FSSKTIPGNE KGVIWIINQF SEKGVDVVDD
SSGLYHVSGH ANRPDLEQMH DIVKPKILIP MHGEHRHLRQ HARLGEEKGI ASAIAVNGMM
MDLTGDAPKV ADYIDTGRTY LDGSVKIGAM DGIVRDRIRM ALNGHVVITA ILDEEDEPLG
EPWVDLKGLA ETGQSNAALA EIMEEDLNQF LMRAGKKTLK DDDKLEQELK RIARQTSQSE
IGKKPEVTVI VSRMR
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