| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0758 |
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| Symbol | |
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| ID | 4076167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 812049 |
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| End bp | 814169 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638006055 |
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| Product | NADH dehydrogenase subunit L |
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| Protein accession | YP_612753 |
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| Protein GI | 99080599 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACCA TTCTCCTCTT TGCCCCTCTG GTGGGGGCTG TGATCTGCGG CTTTGGCCAT
AAGATCATCG GTGAAAAAGC CGCCATGTGG ACTGCCACGG GCCTCTTGTT CCTGACGGCG
CTCTTGTCGT GGATCGTCTT CATCAGCTTT GATGGCGAAA CCCGCATCAT CGAGATCTTC
CGCTGGATCG AGAGCGGTAG CCTCTCGACC TCTTGGTCGA TCCGCCTGGA CCGGCTGACC
GCGATCATGC TGATCGTGAT CACCACCGTG TCGGCGCTCG TGCATCTCTA TTCCTTTGGT
TACATGGATC ACGACCCGCA GTGGAAAGAG GGCGAGAGCT ACAAGCCACG TTTCTTTGCG
TATCTGTCGT TCTTTACCTT CGCCATGCTG ATGCTGGTCA CATCTGACAA CCTCGTGCAG
ATGTTCTTCG GCTGGGAAGG CGTGGGCGTC GCATCTTACC TGCTGATTGG TTTCTACTAC
CGCAAGCCCT CTGCCGGCGC GGCGGCGATG AAAGCATTCA TCGTCAACCG TGTGGGCGAC
TTTGGCTTCT CGCTGGGGAT CTTTGCGCTG TTCTTCCTCA CCGACAGCAT CAACCTCGGC
ACCATCTTTG CGGCAACGCC GGATCTGGCC GAGATGACCG TGTCCTTCCT CTGGACAGAG
TGGAATGCGG CCAATCTGAT TGCCTTCCTG CTGTTTGTTG GCGCGATGGG CAAATCGGCG
CAGCTGATCC TGCACACCTG GCTGCCGGAC GCGATGGAGG GCCCGACACC GGTTTCGGCA
CTTATTCACG CGGCAACCAT GGTGACGGCG GGCGTGTTCC TTGTGTGCCG CATGTCGCCA
CTGATGGAAG TGGCTCCCGA AGCGACTGCC TTTATCACCG TGCTCGGTGC GACCACCGCC
TTCTTTGCTG CAACCGTGGG TCTGGTTCAG ACCGACATCA AGCGCGTGAT TGCCTATTCG
ACCTGTTCGC AGCTTGGGTA CATGTTTGTC GCCGCAGGTG TGGGCATGTA CTCGGCCGCG
ATGTTCCACC TGTTCACACA CGCCTTCTTT AAGGCGATGC TGTTCCTTGG CGCGGGTTCC
GTGATCCACG CCATGCATCA CGAGCAGGAC ATGATGAACT ATGGTGGCCT GCGCAAAAAG
ATCCCCTATA CCTTCTGGGC GATGATGATC GGCACGCTCG CCATCACCGG CGTTGGTGTC
CCGGTCTGGA TCATGAAGCT GGGCGAAATT CCGATCGGCT TTGCGGGCTT CCATTCCAAG
GATGCCATCG TCGAGAGCGC CTATGCCGCC GGGTCGGCCT ATGGGTTCTG GATGCTGGTG
ATCGCCGCCC TGTTCACAAG CTTCTATAGC TGGCGCCTAA TGTTCCTGAC GTTTTATGGG
AAGCCGCGCG GAGACAAGCA TACCCACGAG CATGCACACG AGAGCCCGAT GGTCATGCTG
ATCCCGCTAG GCGTCTTGGC GCTGGGGGCG ATCTTTGCCG GGATGCTGTG GTACAAATCC
TTCTTCGGCC ACACCGACCA GGTCGCGAAA TTCTACGGCG TGCCTTATGC AGAGGCCTCT
GCAGAGGCGC ATGGCGATGA CCACGCGTCC GACGACCACG GCGCTGACGC ATCCCATGGC
GGCGGTGATA AAGAGGCAGA GCATCACTAT GTCTTTGCTG GCGAGCCGGG CGAGGGTGCG
CTGTACATGG CGCCCGACAA TACGCTTTTG GATGACGCGC ATAAGGTTCC GTATTGGGTG
AAAACCTCGC CCTTCATGGC GATGCTTGTC GGGTTCCTCG TGGCCTATTG GTTCTACATC
GTGAACCCGG AGCTGCCCAA GCGCCTGTCG CAGCAGCAGC GCCCGCTCTA CCTGTTCCTC
AAGAACAAGT GGTATTTTGA CGAGCTTTAC AACGTGGTCT TTGTCAAACC CGCTCTGGCA
CTTGGCCGCT TCTTCTGGAA GAAGGGCGAC GGAAAGACCA TTGATGGCTT CCTCAACGGC
GTGGCGATGG GGATTGTGCC CTTCTTCACT CGTCTCGCTG GCCGGGCCCA GTCCGGTTAC
ATCTTCACTT ATGCCTTCTG GATGGTGCTC GGGATCGCAG CCCTTGTCAC CTGGATGTCG
ATCGGCGGAG GATCGCACTG A
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| Protein sequence | METILLFAPL VGAVICGFGH KIIGEKAAMW TATGLLFLTA LLSWIVFISF DGETRIIEIF
RWIESGSLST SWSIRLDRLT AIMLIVITTV SALVHLYSFG YMDHDPQWKE GESYKPRFFA
YLSFFTFAML MLVTSDNLVQ MFFGWEGVGV ASYLLIGFYY RKPSAGAAAM KAFIVNRVGD
FGFSLGIFAL FFLTDSINLG TIFAATPDLA EMTVSFLWTE WNAANLIAFL LFVGAMGKSA
QLILHTWLPD AMEGPTPVSA LIHAATMVTA GVFLVCRMSP LMEVAPEATA FITVLGATTA
FFAATVGLVQ TDIKRVIAYS TCSQLGYMFV AAGVGMYSAA MFHLFTHAFF KAMLFLGAGS
VIHAMHHEQD MMNYGGLRKK IPYTFWAMMI GTLAITGVGV PVWIMKLGEI PIGFAGFHSK
DAIVESAYAA GSAYGFWMLV IAALFTSFYS WRLMFLTFYG KPRGDKHTHE HAHESPMVML
IPLGVLALGA IFAGMLWYKS FFGHTDQVAK FYGVPYAEAS AEAHGDDHAS DDHGADASHG
GGDKEAEHHY VFAGEPGEGA LYMAPDNTLL DDAHKVPYWV KTSPFMAMLV GFLVAYWFYI
VNPELPKRLS QQQRPLYLFL KNKWYFDELY NVVFVKPALA LGRFFWKKGD GKTIDGFLNG
VAMGIVPFFT RLAGRAQSGY IFTYAFWMVL GIAALVTWMS IGGGSH
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