| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0746 |
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| Symbol | |
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| ID | 4076155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 803081 |
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| End bp | 804277 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638006043 |
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| Product | NADH dehydrogenase subunit E |
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| Protein accession | YP_612741 |
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| Protein GI | 99080587 |
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| COG category | [C] Energy production and conversion
[S] Function unknown |
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| COG ID | [COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit
[COG3743] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01958] NADH-quinone oxidoreductase, E subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.331264 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCGTC GTCTTCATCA CGAACAGCCT GACAGCTTTG CGTTCACCCC GGCCAATCAG
GCCTGGGCCG AAGCTCAGAT GACCAAATAC CCCGAAGGCC GTCAGGCCTC GGCGGTCATT
CCGATTCTGT GGCGCGCTCA GGAGCAAGAG GGCTGGATTT CCAAACCCGC GATCGAATAT
GTGGCCGATA TGCTCGGCAT GGCCTACATC CGCGTGCTGG AAGTGGCCTC TTTCTATTTC
ATGTTCCAGC TGCAGCCCAC GGGTTCGGTT GCGCATATCC AGATCTGTGG CACCACGTCC
TGCATGATCT GTGGTGCCGA GGATCTGGTC GCGATCTGCA AGGACAAGAT CTCTGCCAAG
CCGCATACGC TGTCCGAGGA CGGCAAGTTC TCTTGGGAAG AGGTAGAATG CCTTGGCTCC
TGCGCCAATG CGCCGATGGC GCAGATCGGC AAGGATTATT ACGAGGATCT GACCGCGGCA
TCTTTTACCA AGCTGCTCGA TGATCTGGCG GCGGGTAAAC CCGTCGTACC CGGCCCGCAA
AACGGTCGCT ACGCTGCAGA GCCAAAGGCG GGCCTGACCT CGCTCACCGA ATATGAAGCA
GGCAAGCCGC AGTATAATGC CTCGGCGGAG CTTGCGACCG AAATCGGTGA CGGTGTGAAG
CGTATTCAGG GCGATGAAGT TCCGCTCCTG ACCCCATGGG TCGGCAAGGA TGGCGTGGTT
GCAGGGCGTG CCGCTGCAGA TCCGACGCCG CCCGCGCCAG AGCGTCCGCA ACCCGCGGCC
AAGCAGGCTG AGACCGCCAA GAAGAAGGCT CCGGCCAAGC CTGCGGTCAA GAAATCGGAT
GCGGCAACGC CTGCACAGCC CGAAGCCGCC GCCGCAAAGG TGACGGAACC CAAGGCGGAC
TTGGAAGAAC AAGCACCCGA GACGCTGACA GCGGCGCGCG AGGGCGGGGC GGACGATCTC
AAGCTCCTCA AAGGTGTGGG GCCAAAGCTC GAACAGACGC TCAATGAGCT GGGCTTTTTC
CACTTTGACC AGATTGCCAA ATGGACCGAG GCCGAGGTGG CCTGGGTGGA TGCGCGCCTG
AAGTTCAAAG GCCGCATCGA GCGCGACGGC TGGATCGAGC AAGCCAAGCA ACTGGCAGCC
GGTGAAGAAA CCGAGTTTGC CAAATCGGCC AAGAAAGACG GCCGCTACAA AGACTAA
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| Protein sequence | MLRRLHHEQP DSFAFTPANQ AWAEAQMTKY PEGRQASAVI PILWRAQEQE GWISKPAIEY
VADMLGMAYI RVLEVASFYF MFQLQPTGSV AHIQICGTTS CMICGAEDLV AICKDKISAK
PHTLSEDGKF SWEEVECLGS CANAPMAQIG KDYYEDLTAA SFTKLLDDLA AGKPVVPGPQ
NGRYAAEPKA GLTSLTEYEA GKPQYNASAE LATEIGDGVK RIQGDEVPLL TPWVGKDGVV
AGRAAADPTP PAPERPQPAA KQAETAKKKA PAKPAVKKSD AATPAQPEAA AAKVTEPKAD
LEEQAPETLT AAREGGADDL KLLKGVGPKL EQTLNELGFF HFDQIAKWTE AEVAWVDARL
KFKGRIERDG WIEQAKQLAA GEETEFAKSA KKDGRYKD
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