| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0714 |
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| Symbol | |
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| ID | 4076991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 768727 |
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| End bp | 769734 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638006011 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_612709 |
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| Protein GI | 99080555 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0299286 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGACTT TTACCATCCG ACGGCTGATC ATAGCAGTGC CGACACTGCT GTTCATCAGT
CTCGTGATCT TCCTGCTGCT GGAACTCGCC CCCGGCGATC CCATGGCACA GGTTCCCCTG
ACCGTCCCCC CCGAAGTGAA AGAGAAGATG CGCCTGGCCC TCGGCCTTGG CGAGCCCGTC
CATATCCGGT TCTGGAAATG GCTGGTGCAG TTCTTCTGGA TCGAACCTCA GGTTCTGATC
GACCATATCT TTGGCACATC CTTTTCCGCA GGCGATCTGC GTGTCATCTC CTGGCAGACC
CGGTCTCCGG TGATGGACAT CGTGGTGCAG CGCTTGCCGC AGACCCTCTG GGTTGTGGGC
ACCGCCTATA TCGTGGCCAT CCTGATCGCC CTGCCCATCG GCATCTACTC TGCCTACCGC
CAGTACAGCT GGTTCGACCA GATGGGGACA TTCGTCTCCA TGGTGGGCTT CTCGGTGCCG
CCGTTCTTCT CTGGTGTTCT GGTCATCGTG ATCTTCTCGG TTCAGCTTGG CTGGTTCCCG
TCGATCTATG ACACCACGCT CGAGGTCAAC AGCTGGGAAA CCTTCGTGAA GCAGCTCCAG
CAGATGGTGA TGCCGGTGAT GGTACTGGCA CTTCAGATCA CCGCACAGCT CAGCCGGTTC
ATGCGCGCCT CCATGCTCGA CAACCTTAAC CAGGACTACG TGCGCACCGC GCGCGCCAAG
GGCCTGGGCG AGTATACGGT TGTCATGGTG CATGTGCTGC GCAATTCCAT GATCCCGGTT
GTCACCGTGA TCGCCCTGGG CATTCCGTCG ATCTTTGGCG GCGCCATCAT CACCGAACAG
GTGTTCAAGG TGAACGGGAT TGGCCAGTTG CTGATCGGCG CCATCCAGGC CAACGACCTG
CCTATGGTGC AGACGCTTAC CTTCATCTTT GCCGTGCTCA TCGTGCTGTT CAACCTGATC
GCCGATGTGC TCTACGGCAT TCTCGACCCG AGGATCCGCT ATGACTGA
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| Protein sequence | MLTFTIRRLI IAVPTLLFIS LVIFLLLELA PGDPMAQVPL TVPPEVKEKM RLALGLGEPV
HIRFWKWLVQ FFWIEPQVLI DHIFGTSFSA GDLRVISWQT RSPVMDIVVQ RLPQTLWVVG
TAYIVAILIA LPIGIYSAYR QYSWFDQMGT FVSMVGFSVP PFFSGVLVIV IFSVQLGWFP
SIYDTTLEVN SWETFVKQLQ QMVMPVMVLA LQITAQLSRF MRASMLDNLN QDYVRTARAK
GLGEYTVVMV HVLRNSMIPV VTVIALGIPS IFGGAIITEQ VFKVNGIGQL LIGAIQANDL
PMVQTLTFIF AVLIVLFNLI ADVLYGILDP RIRYD
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