| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0702 |
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| Symbol | |
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| ID | 4077369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 751184 |
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| End bp | 751918 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005999 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_612697 |
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| Protein GI | 99080543 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0691872 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTTAA GATCAACAAA GTGGGCCATC GCTCTGAGTG TCTCGTTTTT AATGGCGGGC
ATGGACAGCG CGCGGGCAGA GGCGATCAAA GCGTACACCG CAGCCCTACC GCCCTACACG
ATCGCACCGG ACCTCGAGAT GCCGGGAATC TCTCACGAGA TTTTGGAAGA GATGTCGAAA
CGCTCGGGCG TGACAATCGA GATCGAATAT CTTCCTTGGA AGCGCGCGCA ATCGATGGCG
CAGAAAACGC CGAACGCCCT GCTTTTTACC GCCGCGCGCA CCGAGTCGCG TGAAACCGTC
TACAAGTGGA TCGCAGAGTT TATTGTGGCT GACGAAGTAT TCGCGACCAC CACCGAGGCG
GTGAACTCTC TTGAGGACGC GCGCCAGCTC TCTCGAATTG CCACACTTGG GGGGGCGCCA
CGAGAAAAAC GGCTCGCAAA GCTGGAGTTC GGCAATGTGC AGTCCACCCC CGATACCGCG
ACGGCTGCAC GTCTCTTGAC CGGCGGGCGC GTGGATGCCT GGTTCACACT GAGTCAGCGC
GTCCTGCACG CCGTGAAGTC AGAGGGGCTC GACCCGAGCA CCATCGTGAT CGGCACACCG
GTGGGCAGTC TGCGCCTTTG GCTGGCTTCA AACGCCGAAT TCGATCCCGA AGTCGCCGCC
AAACTTGCGC AGGCCTTTGA AGATATGAAA GCTGATGGCA GCTACGAGGC CATCGTCAGC
GCCTATCTGA ACTGA
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| Protein sequence | MILRSTKWAI ALSVSFLMAG MDSARAEAIK AYTAALPPYT IAPDLEMPGI SHEILEEMSK
RSGVTIEIEY LPWKRAQSMA QKTPNALLFT AARTESRETV YKWIAEFIVA DEVFATTTEA
VNSLEDARQL SRIATLGGAP REKRLAKLEF GNVQSTPDTA TAARLLTGGR VDAWFTLSQR
VLHAVKSEGL DPSTIVIGTP VGSLRLWLAS NAEFDPEVAA KLAQAFEDMK ADGSYEAIVS
AYLN
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