Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0673 |
Symbol | |
ID | 4077281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 720577 |
End bp | 721068 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 638005970 |
Product | hypothetical protein |
Protein accession | YP_612668 |
Protein GI | 99080514 |
COG category | [S] Function unknown |
COG ID | [COG2847] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0451444 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.234827 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTACA AATCCCTCGG CCGGTCTGCG GCCTTTGGTG TGTTCGCAAG CGTTGCATTC GCCACTTCGG CTTCGGCACA GATGCTTGTG CAGGATGCCT ATGCGCGATC CTCCAACAAA ATGGCGGGCG CGGCCTTTAT GGAAATCACC AACCAAGGCG CATCAGAGGA TCGCCTGATC GACGCACGCT CTGATGTGGC CAAGCGTGTG CAACTGCACA CACACCAGGA AGACGCCAAT GGCGTGATGA AGATGATGCA TGTCGAAGAA GGGTTTGCGA TTCCCGCCGG AGAGACTCAT CTGCTACGGC GTGGTGGCGA TCACGTCATG TTTATGGGGC TCACACGGGA ACTCAAGGAC GGCGAGACTG TCGATGTGAT CCTTGTGTTT GAAAACGCAG GAGAAGTGTC GGTGCAGATC CCTGTCGACA TGGATCGCGC ACCCAAGGGC GGCCACGGAA ATCACAGCGG GCACGGTGAT CACTCGAACT GA
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Protein sequence | MSYKSLGRSA AFGVFASVAF ATSASAQMLV QDAYARSSNK MAGAAFMEIT NQGASEDRLI DARSDVAKRV QLHTHQEDAN GVMKMMHVEE GFAIPAGETH LLRRGGDHVM FMGLTRELKD GETVDVILVF ENAGEVSVQI PVDMDRAPKG GHGNHSGHGD HSN
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