| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0671 |
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| Symbol | rpmB |
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| ID | 4077279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 719704 |
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| End bp | 719994 |
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| Gene Length | 291 bp |
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| Protein Length | 96 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005968 |
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| Product | 50S ribosomal protein L28 |
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| Protein accession | YP_612666 |
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| Protein GI | 99080512 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0227] Ribosomal protein L28 |
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| TIGRFAM ID | [TIGR00009] ribosomal protein L28 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0158059 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.225806 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGCGCC GTTGCGAACT GACCGGAAAA GGCCCGATGA CTGGCAACAA TGTCAGCCAC
GCCAACAACA AAACCAAGCG TCGTTTCTTG CCGAACCTGA ACGACGTCAC CCTGCAGTCC
GAGACTCTCG GTCGCGGCGT GAAGCTGCGC ATCTCCGCAG CAGCCCTGCG TTCGGTTGAC
CACCGCGGTG GTCTGGACGC CTTCCTGGCC AAAGCCAAGG ACGAAGAGCT CTCCGCCGCA
GCGCTGAAGG TCAAAAAAGA AATCGCAAAA GCACAAGCTG CTGAGGCCTA A
|
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| Protein sequence | MSRRCELTGK GPMTGNNVSH ANNKTKRRFL PNLNDVTLQS ETLGRGVKLR ISAAALRSVD
HRGGLDAFLA KAKDEELSAA ALKVKKEIAK AQAAEA
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