Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0616 |
Symbol | |
ID | 4078129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 656123 |
End bp | 656890 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638005913 |
Product | hypothetical protein |
Protein accession | YP_612611 |
Protein GI | 99080457 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACCATAC CTCAGTCATT GGAGCGCGCT GCCGCCAATC TTGCGAAGAC CAAGCCGCTG GTGCGGCACC AGAAAGCCCT TCCGGATGGG TCAAAGCCGC AGTTGCGCCG CTATGAGGTG GCCAGTCTCT TGCCCAATGG CAACCCGACC GAGACCCGCC ACATTGCGCC GGCCCTGCCC CTGTTTGAAC AAGCCTTCAC GGCATTCACG CGCGGCTCGC TCATCGAGAC CGACTATGGC CCGGTTGCAA TCGAAGATCT TTATCCCGGT GACCGGGTAC TCACCCGCGA TGGCAGCTAT CAGACACTGA TCTGGAAAGG CATGACGACG ATGGTGCCTG GCCATCAGGC TGCAACCGGT GGTCCCTTGT CGATGACCAG TTTCATGGCC GATAGTTTTG GGATGGAAAA GCCGATGTCC TGCGTGGTGA CCGGCCCGGC AGCGCGCCTG CTGCGCACGC CCATGCATCT GCGCCATGCG GAGGGCGACA GCCCGCTCTT GACCCCGGTC ACGGAATTCA TCGATGGCAT GAACATCGTC GAGACAACGC CCCCAACGCC GATCGACATG TATCACCTCT GCCTTGCCAA ACATGCGGTG ATCAAAGTGG GCGGCCTGGA GTTTGAGACC TATCATCCAG GCCCAGAGGC GCTTCGACTG GTGAGCTATC CGATCAAGAC GCTGTTCTTG AACATGTTTC CACATGCCGA CAAGATTTCG GATTTTGGCC CGCTCGCCTT TGATCGCGCG CGCACCACGC AAGCCTGA
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Protein sequence | MTIPQSLERA AANLAKTKPL VRHQKALPDG SKPQLRRYEV ASLLPNGNPT ETRHIAPALP LFEQAFTAFT RGSLIETDYG PVAIEDLYPG DRVLTRDGSY QTLIWKGMTT MVPGHQAATG GPLSMTSFMA DSFGMEKPMS CVVTGPAARL LRTPMHLRHA EGDSPLLTPV TEFIDGMNIV ETTPPTPIDM YHLCLAKHAV IKVGGLEFET YHPGPEALRL VSYPIKTLFL NMFPHADKIS DFGPLAFDRA RTTQA
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