Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0615 |
Symbol | |
ID | 4078128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 655592 |
End bp | 656092 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638005912 |
Product | AsnC family transcriptional regulator |
Protein accession | YP_612610 |
Protein GI | 99080456 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.615736 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCACCA CACGTCTGGA CCCGATCGAC CGCAAGATTC TGTCGGAGCT ACAGGCCGAT GGCCGGATGA CGAATGTCGA ACTGGCCAAG CGCGTCGGAA TTTCTGCGCC CCCCTGCCTG CGGCGGGTGC GCGCCTTGGA GGAGGCGGGT TTGATCCGGG GCTACCACGC GGAGGTGAAC GACCGCGAGT TGGGCTTTGA GGTGCAGGTC TTTGCGATGG TGGGCCTCGA AAGCCAGGCC GAAGCGGAAC TCAGTGCCTT TGAAGAAAAA TGCCGCAGTT GGCCCTTGGT TCGGGAATGC CACATGCTGA ATGGCGAGGT GGATTTCATC CTGAAGTGCG TGGCGCCGGA CCTGTCGACG TTCCAGAGCT TTTTGACCAG CGATCTGCTG ACCACGCCCA ATGTGGCGAG CGTCAAGACG TCGCTGGTTA TCCGGGGTGC CAAGGATGAG CCAGGCGTGC CCTTTGACGT GCTTGAAGAG CGGCTCGCGC GCGAAGCCTG A
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Protein sequence | MVTTRLDPID RKILSELQAD GRMTNVELAK RVGISAPPCL RRVRALEEAG LIRGYHAEVN DRELGFEVQV FAMVGLESQA EAELSAFEEK CRSWPLVREC HMLNGEVDFI LKCVAPDLST FQSFLTSDLL TTPNVASVKT SLVIRGAKDE PGVPFDVLEE RLAREA
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