Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0565 |
Symbol | |
ID | 4077916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 602298 |
End bp | 603287 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638005862 |
Product | oxidoreductase-like |
Protein accession | YP_612560 |
Protein GI | 99080406 |
COG category | [R] General function prediction only |
COG ID | [COG0673] Predicted dehydrogenases and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00933503 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACACAAC CTATTCGTTG GGGCATTCTG GGAGCCGCGA AATTCGCGCG CGAGCATATG GGGCCAGCCA TTCACGCTGC AAACGGTGCT GAACTTGCCG CTCTGGCCAC CTCAAGCGCG GACAAAGCTG CGCCATTTCA ATCCTTTGCA CCCGGAATAG CAGTGCATGA AAGCTATGAG GCGTTGCTCG CCGACCCGTT GATCGATGCG GTTTACATCC CGCTTCCAAA CCATCTCCAT GTGGAGTGGG CGCTGAAGGC AATGCAGGCG GGCAAACATG TGCTGGTCGA AAAACCCGCG ACGCTACGCG AGGAGGAGTT CGACCAGTTG ATTGCGGCGC GGGATGCGGC GGGTGTTCTT GCAGCCGAAG CCTATATGAT CGTGCACCAC CCGCAATGGC AGCGCGCGCG CGAACTTGTG CATACCGGTG CGCTGGGGCA GGTGAAGCAT GTCTCGGGGA AGTTCTCTTT TGACAATCGC AGAGACGTCG ACAACATCCG CAATCGTCCG GAAACAGGGG GCGGCGCCCT GCGCGACATT GGAGTCTATG TCTTGGGATC GGCACGCTTT GTCACCGGTG AGGAGCCGCA GGACATCAGT GCGCAGATTG AATGGGAAAA CGGGGTGGAT GTGCTCTCTA ATGTGCAGGC GCGGTTCCCG AGCTTTCTTT ATACGGCCTA TGTCAGCACC CGTTTGCAGC CCTTTCAGGA GATGGTGTTT CACGGCGACA AAGGTGTATT GCGCCTCACA GCGCCCTTTA ATCCGCGGGT CTTTGGGGAG GCACGGCTGG AGTTGCACCA GGCCTCCCAT GCGGCGGGAT CGGGACGCGT CATCGAGGAA CGCTTCCCCA TTGCCGATCA CTATAAGCTG CAGGTTGAGG CCTTCGGAAA GAGTGTGCGC GATGGCACGC CCTATGCCTG CCCGCTAGAG TTCTCGCGCG GGACGCAACG CGCGCTGGAT CAGATTTTTG CCTGCGCCAC CACGCTCTGA
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Protein sequence | MTQPIRWGIL GAAKFAREHM GPAIHAANGA ELAALATSSA DKAAPFQSFA PGIAVHESYE ALLADPLIDA VYIPLPNHLH VEWALKAMQA GKHVLVEKPA TLREEEFDQL IAARDAAGVL AAEAYMIVHH PQWQRARELV HTGALGQVKH VSGKFSFDNR RDVDNIRNRP ETGGGALRDI GVYVLGSARF VTGEEPQDIS AQIEWENGVD VLSNVQARFP SFLYTAYVST RLQPFQEMVF HGDKGVLRLT APFNPRVFGE ARLELHQASH AAGSGRVIEE RFPIADHYKL QVEAFGKSVR DGTPYACPLE FSRGTQRALD QIFACATTL
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