| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0463 |
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| Symbol | |
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| ID | 4078345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 481430 |
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| End bp | 482221 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005759 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_612458 |
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| Protein GI | 99080304 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCA CTTTTGCCCT GACTGCCCTT GCAACGGCTG TCTTTGCCAC CGGCGCCCTG
GCTGCCGATC TGCCGGATCT TGAAGGGCGC GAGGTCGTGT TTGCGACCGA AAACACCTAT
CCGCCTCTGC AGTTCATCGA CCCCAACAGC GGCGAGGCAA TTGGTTGGGA ATATGATGCA
GTGGCCGAGA TCGCCAAGCG CATCAACATC ACCGTGGTCT ACGAGAATTC GAGCTGGGAT
GCGATGATCC CCGCGATCAC CGCAAGCCAG TATGATGTCG CCATGAATGG CATCACCATT
CGCGATGACC GCAAGGAAAA GGTCGACTTC TCCGAGAGCT ACCTGACCTC GCAGATGCGC
ATGATCGTTG CGGGCGACGA AGACCGGTTC GAGGACGCAG CAGGCTTTGC CGCGGATGAC
GACCTCCTGG CGGCAGCGCA GCCCGGCACC ACGCCCTTCT ATGTCACCGT CTATGATGTG
CTGGATGGTG ATGAAGCAAA CCCGCGGATC AAACTGTTTG AAACCTTTGG CGCCTCGCTG
CAGGCGCTGC GCGCAGGTGA TGTGGATCTC GCTCTGTCCG ACAGCACCGC CGCAAGTGGC
GTTGTTGCGG CCTCGGACGG TGCACTGAAA ATCGTTGGCG AGCCGCTCGG CACCGAGGAC
TTTGGCTTTA TCTTCCCCAA AGGCAGCGAT CTGGTGGAAC CCGTCAATGC CGCGCTTGCT
GCGATGAAGG CCGATGGCAC GCTGGATGCG CTCAACAAGA AGTGGTTCCT CGACTACAAG
ATGGGCCAAT AA
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| Protein sequence | MTRTFALTAL ATAVFATGAL AADLPDLEGR EVVFATENTY PPLQFIDPNS GEAIGWEYDA
VAEIAKRINI TVVYENSSWD AMIPAITASQ YDVAMNGITI RDDRKEKVDF SESYLTSQMR
MIVAGDEDRF EDAAGFAADD DLLAAAQPGT TPFYVTVYDV LDGDEANPRI KLFETFGASL
QALRAGDVDL ALSDSTAASG VVAASDGALK IVGEPLGTED FGFIFPKGSD LVEPVNAALA
AMKADGTLDA LNKKWFLDYK MGQ
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