| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0355 |
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| Symbol | |
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| ID | 4077685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 360576 |
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| End bp | 361823 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638005650 |
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| Product | D-amino-acid dehydrogenase |
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| Protein accession | YP_612350 |
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| Protein GI | 99080196 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACTC AGCATATTGT TGTGGTTGGT GCAGGCATCA TGGGGGCCGC GAGCGCCATC
TGGCTGCGCC GGGCGGGGCT GGAGGTGACG CTGGTGGACA AGGGGCGGCC CGGCATGGGG
GCCTCTTATG GCAATGCCTG TATTCTGGCG CGTTGCGCGA TGGTTCCTGT GACGACACCG
GGGCTGATCG CGAAGGGGCC AAAGTATCTG TTGGACCCGA ACTTTCCGCT CTATCTGCGG
TGGTCCTATT TGCCCCGTCT GTTGCCCTGG CTTGGGCGCT ATCTGAAACA CGCAAATGAT
CAGGACACCC GGCGTATCTC GCAAGGGCTC GCGGGGATTG TGGGCGACAG TGTCGAGCAG
CACAAAGCGC TCACCGAAGG GATGCCTGCG GCCAAATGGA TCCAGGACAG CGATTACAAC
TTTGTCTACC GCGACCGCGC GGCCTTTGAG GCGGAGTCTT ATGTGTGGTC GCTTAGGCGC
GAGGCAGGGT TTGAGCCCGA GATCATTGAA GGCGATGACG TCCACGCGCG CGAGCCGATC
CTGTCGCGGG ACATGCGGCT TTTGGCGGTC AACAAGGACC ACGGCTATAT CCTCAACCCC
GGCAACTATG TGCAGGATCT GGTGCGCCAG CTCGAGGAGA TGGGCGGGCG GTTTGTTCAG
GCCGAAGTGA AGGATTTTGA CCTCATGGGA GGGCAGATCA CCGCGGTGGA CACCGATCAG
GGGCGCATCG CCTGTGATCG GGCGGTGCTC TCGGCGGGGG TCTGGTCGGC GGCGCTTATG
AAGCGGCTCG GGCTCGACGT GCCGCTGGAG GCAGAGCGCG GCTATCATAT CGTCTTCAAG
GACCCAAGCC AGCTGCCAAC CGCGCCGATG ATGCTGACCG AAGGCAAATT CGTGGCCACG
CCGATGGATC AGGGGCTGCG CTGTGCGGGC ATCGTGGAGT TTGGCGGGCT GAGCGATGTG
AAGTCCAAGA AGCCGCTTGA GATGCTGCGC CGCACCGTCG CGCGCACATT CCCGAACCTC
AGTCACTCTG CCGAGGAAGA ATGGCTGGGC TTTCGCCCCG CCCCTTCAGA CAGCCTGCCG
CTTATTGGTG AAGTGCGCGG CAGCGGTGTC TTTACCGCTT TTGGGCACCA TCACATTGGG
TTGACAGGCG GGCCCAAGAC AGGCCGACTG GTCGCGGATA TGATCACGGG CAACTGGCCC
AATGCCGATA CCAGCGCCTT TGATCCAATG CGCTTTGCAA CGCAATAA
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| Protein sequence | MATQHIVVVG AGIMGAASAI WLRRAGLEVT LVDKGRPGMG ASYGNACILA RCAMVPVTTP
GLIAKGPKYL LDPNFPLYLR WSYLPRLLPW LGRYLKHAND QDTRRISQGL AGIVGDSVEQ
HKALTEGMPA AKWIQDSDYN FVYRDRAAFE AESYVWSLRR EAGFEPEIIE GDDVHAREPI
LSRDMRLLAV NKDHGYILNP GNYVQDLVRQ LEEMGGRFVQ AEVKDFDLMG GQITAVDTDQ
GRIACDRAVL SAGVWSAALM KRLGLDVPLE AERGYHIVFK DPSQLPTAPM MLTEGKFVAT
PMDQGLRCAG IVEFGGLSDV KSKKPLEMLR RTVARTFPNL SHSAEEEWLG FRPAPSDSLP
LIGEVRGSGV FTAFGHHHIG LTGGPKTGRL VADMITGNWP NADTSAFDPM RFATQ
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