| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0328 |
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| Symbol | |
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| ID | 4076224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 333138 |
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| End bp | 334046 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638005623 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_612323 |
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| Protein GI | 99080169 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.955729 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGCA ATCCGATAAA ATGGCCCAAT GGCGCCCGCT GCGCCTGTGC GATCACGTTT
GATGTCGATG CCGACAGCCT GATCCATATC GCCCGTCCCG AAGACGCGCA CCGCCGCCTC
TATCCGATCA GCATGGGCCG CTATGGCCCC AATTCCGGCG TGCCGCGCAT CCTGGACACC
TATCGACGGC TTGGGCTCAA GCAGTCCTTC TTCATGCCCG GCTGGGTGAT GGAGCGCTAT
CCCGAAACGG TTGAGGCGAT CCTCGCCGGG GGCCATGAGA TCGGTCATCA CGGTTATCTG
CACGAAGACC CCGCCGAGCA GAACGCCGAA GACCAGACCT ATTGGTTCGA GCGCGCGCTG
GAGGTGCACC GGCGCCTCAC CGGTCGCACG CCGCGCGGCT ACCGCGCCCC GGTCTATAAC
GTCACGCCCG AGGTGCTCTC GCTCGCGGTG CAGCATGGGC TGACCTATGA AAGTTCGATG
ATGGCGGATG ATCTGCCCTA CCGGATCGAC ACCCCAACGG GCGCGCTCTA CGAGCTGCCG
GTGCATTGGG GCAGTGATGA TTGGCCACCC TTCGCGCATT TCGACGAGAT CGGCTATAAG
ATGCCGGTGA TGTCGCCACG TCGCGGGCTT GAGGCCTCTT TTGAAGAGTT TGAAGCGCAA
TATGAGGCCG GAGGTCTCTG GATCGGCATC TGGCATCCTT TTCTCACCGG GCGGCTGGCC
CGCTGGCGGG TCGTGGAACG CTGGCTCGAA GCGGTGCTGG CGCGTGGCGA TGTCTGGTTC
GCACCGCTCG AAGAGATCGC CGCCTATGCG GCCTCCCAAG AGGCCGAAGG CCTTTGGCAG
CCGCATCGCG AACCTGCCGC TCCCTACGCA AATCCCGTTT TGATGGAGAA AACGCATGAC
CAGTTTTGA
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| Protein sequence | MIRNPIKWPN GARCACAITF DVDADSLIHI ARPEDAHRRL YPISMGRYGP NSGVPRILDT
YRRLGLKQSF FMPGWVMERY PETVEAILAG GHEIGHHGYL HEDPAEQNAE DQTYWFERAL
EVHRRLTGRT PRGYRAPVYN VTPEVLSLAV QHGLTYESSM MADDLPYRID TPTGALYELP
VHWGSDDWPP FAHFDEIGYK MPVMSPRRGL EASFEEFEAQ YEAGGLWIGI WHPFLTGRLA
RWRVVERWLE AVLARGDVWF APLEEIAAYA ASQEAEGLWQ PHREPAAPYA NPVLMEKTHD
QF
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