| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0325 |
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| Symbol | |
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| ID | 4076221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 329940 |
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| End bp | 330761 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638005620 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_612320 |
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| Protein GI | 99080166 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGTTC ATCTGAAACA TGCCCTTCCC AAAGCCTTCT GGATTGGCGG CCTCGTTCTG
GTGTTCGTGC TGCTTTATGC CCCGATCCTG TCGGCCGTGA TGTTCTCTTT CAGCGCCGAT
CGCTTCCCCA GCCTCAGCCT GTCGGGGTTC AGTTCCAAAT GGTATGCGCA AGTCCTCAGC
GACCGCGCCA TGCTGGACGC CCTCTGGAAC AGCCTGCGCG TGGCCATGCT CACAGCGCTC
ATCGCGACGG CGCTTGGATT TGCCGCGGCT TATGCAGATT ATCGGTTCCG TTTTACCGGC
CAGAGAGCCG TTCTGGCGCT GGCCTTGTTA CCGCCGACGG TGCCGCTGGT GATCCTGGGG
CTTGCCATGC TCGCCTTTTT CTCTCGCATC GGGATCGCAG GGACCTTGAT GGCGGTGGTG
GCCGCCCATG TGGTGATCGC GGCACCTTTT GCGATGGCGG TCTGCCGCCT GCGGCTGGCG
CAGCTTGATG ACAGCCTTGA AATTGCGGCT CAGAACCTCG GCGCGCTGCC GCATTCTGCG
CTCACCCGGA TCGTTCTGCC CCATACTCTG CCCGCGATCT TTGCAGCCTT TCTCATCACC
TTTGCCGTGT CCTTTGATGA ATATGTCATC TCCTGGTTCA CCGGGGGGCT CAACCAGACC
ATCCCGGTTG CGGTTCTGAC CACGCTGCAG GGGCAGGTGG ACCCCACGAT CCATGTGATC
GGCACATTGA GTTTTTCCGT CACGCTGACG CTGGTTCTGA TCGCGCTTGG CGTGGTCCTG
ACCCAGAGCA GCGGCGCCAT GTCCAAGGAG GAGACAACAT GA
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| Protein sequence | MPVHLKHALP KAFWIGGLVL VFVLLYAPIL SAVMFSFSAD RFPSLSLSGF SSKWYAQVLS
DRAMLDALWN SLRVAMLTAL IATALGFAAA YADYRFRFTG QRAVLALALL PPTVPLVILG
LAMLAFFSRI GIAGTLMAVV AAHVVIAAPF AMAVCRLRLA QLDDSLEIAA QNLGALPHSA
LTRIVLPHTL PAIFAAFLIT FAVSFDEYVI SWFTGGLNQT IPVAVLTTLQ GQVDPTIHVI
GTLSFSVTLT LVLIALGVVL TQSSGAMSKE ETT
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