| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0280 |
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| Symbol | rplQ |
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| ID | 4077415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 286119 |
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| End bp | 286544 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638005574 |
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| Product | 50S ribosomal protein L17 |
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| Protein accession | YP_612275 |
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| Protein GI | 99080121 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0203] Ribosomal protein L17 |
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| TIGRFAM ID | [TIGR00059] ribosomal protein L17 |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.39249 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTCACG CACGTGGTTA TCGCCGCCTG AACCGTACTC ACGAGCACCG TAAGGCCCTG
TTCTCCAACA TGGCTGGCTC GCTGATCGAA CACGAACAGA TCAAGACGAC CCTTCCCAAA
GCAAAAGAAC TGCGTCCGAT CATCGAAAAG ATGATCACGC TGGCAAAGCG CGGCGACCTG
CACGCTCGCC GTCAGGCCGC GTCCAAGCTG AAAGAAGACA AGGACGTTGC AAAACTGTTC
GACGTTCTGG GCCCGCGCTA CAAGGATCGT CAGGGCGGTT ACGTCCGCAT CCTGAAGGCC
GGTTTCCGTT ACGGTGACAT GGCGCCTATG GCGATCATCG AATTCGTTGA CCGCGACGTT
TCCGCCAAAG GCGCAGCCGA CAAGGCCCGT CTGGCAGAAA TCGAAGCTGT CGAAGACGAA
GAATAA
|
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| Protein sequence | MRHARGYRRL NRTHEHRKAL FSNMAGSLIE HEQIKTTLPK AKELRPIIEK MITLAKRGDL
HARRQAASKL KEDKDVAKLF DVLGPRYKDR QGGYVRILKA GFRYGDMAPM AIIEFVDRDV
SAKGAADKAR LAEIEAVEDE E
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