Gene TM1040_0274 details

Gene Information

• Locus tag: TM1040_0274
• Symbol: rplO
• ID: 4077682
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ruegeria sp. TM1040
• Kingdom: Bacteria
• Replicon accession: NC_008044
• Strand: +
• Start bp: 281136
• End bp: 281606
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 638005568
• Product: 50S ribosomal protein L15
• Protein accession: YP_612269
• Protein GI: 99080115
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0200] Ribosomal protein L15
• TIGRFAM ID: [TIGR01071] ribosomal protein L15, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.0537991
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 0.650212
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAACTCA ATGAACTGCG CGACAACCCA GGTGCATCCC CGAAACGGAC CCGCGTTGGC 
CGTGGTCCGG GCTCCGGCAA AGGTAAAATG GGTGGCCGCG GTATCAAAGG TCAGAAGTCC 
CGTTCCGGTG TGGCGATCAA TGGCTACGAA GGTGGCCAGA TGCCGCTCTA CCAGCGTCTG 
CCCAAGCGTG GCTTCAACAA GCCCAACGCG AAGAAGTACG CTGTTGTGAA CCTCGGCCTG 
ATCCAGAAAT TCATCGACGC AGGCAAGCTC GACGCAGCTT CGATCACCGA AGACAGCCTC 
GTGGCATCCG GCCTCGTCCG TCGCAAGCTC GACGGCATCC GCGTGCTGGC GAAGGGTGAA 
TTCACCGCCA AGGCGACCAT CGCTGTGACC GGTGCCTCCA AGTCTGCCGT TGAGGCAGTT 
TCCAAGGCAG GCGGCGCCCT GACCGTGGCA TCTGAGGCCG CAGCTGAGTA A 

 

Protein sequence

MKLNELRDNP GASPKRTRVG RGPGSGKGKM GGRGIKGQKS RSGVAINGYE GGQMPLYQRL 
PKRGFNKPNA KKYAVVNLGL IQKFIDAGKL DAASITEDSL VASGLVRRKL DGIRVLAKGE 
FTAKATIAVT GASKSAVEAV SKAGGALTVA SEAAAE