| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0233 |
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| Symbol | rplL |
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| ID | 4076266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 247040 |
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| End bp | 247417 |
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| Gene Length | 378 bp |
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| Protein Length | 125 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638005527 |
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| Product | 50S ribosomal protein L7/L12 |
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| Protein accession | YP_612228 |
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| Protein GI | 99080074 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0222] Ribosomal protein L7/L12 |
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| TIGRFAM ID | [TIGR00855] ribosomal protein L7/L12 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0819772 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGATC TGAAAGCACT CGCGGAAAGC ATCGTTGGTC TGACCCTGCT GGAAGCACAA
GAACTGAAAA CCATCCTCAA AGACGAGTAC GGCATCGAGC CGGCAGCTGG CGGCGCCGTA
ATGGTTGCAG CCGGTGGCGA CGCAGCAGGC GGCGCAGCTG AGGAAGAGAA AACCGAATTC
GACGTCGTTC TGAAGAACGC CGGCGCGTCC AAAATCAACG TGATCAAAGA AGTCCGCGGC
ATCACCGGCC TGGGCCTCAA AGAAGCCAAA GAGCTCGTTG AAGCTGGCGG CAAGATCAAA
GAAGGCGTGG ACAAAGCAGA AGCCGAAGAC ATCAAAGGCA AGCTGGAAGC AGCTGGCGCC
GAAGTCGAGC TGGCCTAA
|
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| Protein sequence | MADLKALAES IVGLTLLEAQ ELKTILKDEY GIEPAAGGAV MVAAGGDAAG GAAEEEKTEF
DVVLKNAGAS KINVIKEVRG ITGLGLKEAK ELVEAGGKIK EGVDKAEAED IKGKLEAAGA
EVELA
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