Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0161 |
Symbol | |
ID | 4078769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 177326 |
End bp | 178654 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638005455 |
Product | hypothetical protein |
Protein accession | YP_612156 |
Protein GI | 99080002 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCACG TTTTTCCCCG TCACACAAAA TCCGACCTGC CCACCGCTGT TGGTGGGGAT GGCTGCTATC TGATTGATGC AAATGGAAAA CGATACTTCG ACGGTTCAGG CGGGGCGGCG GTTTCTTGTC TCGGGCATTC CGATGCGGCC GTGATCAAGG CCGTGCAGGA GCAGGTTGAA AAGCTGGCCT TTGCGCATAC TGGTTTCATG ACGTCCGAGC CTGCCGAGGC TCTGGCGGAC CTGCTGATCT CAAAGGCGCC GGGCACTCTC GATCGCGTCT ATTTTGTCTC TGGCGGGTCT GAGGCCACCG AGGCCGCGAT CAAGCTGGCG CGGCAGTATC ACCTCGAACG CGGTGAGCCG CAGCGGCGTC ACCTGATTGC CCGGCGACAG AGCTATCACG GCAACACACT GGGTGCCCTT GCAGCTGGAG GCAATGCTTG GCGGCGCCAG CAGTTCGACC CGCTTTTGAT CGGCGTGTCG CATATTGCGC CTTGCTATGA ATACGTGGAT CGCAGCGACG GAGAGAGCAG CTTTGACTAT GGCCAGCGGG TCGCAAATGA GCTCGAAGCT GAAATCCTGC GTCTTGGTCC CGACACGGTC ATGGCCTTTA TGGCCGAGCC CGTGGTTGGA GCAACCCTGG GGGCTGTGCC TGCGGTCGAG GGCTACTTCA AGCGGATCCG CGAGATCTGT GATACCTATG GTGTGTTGCT GATCCTCGAC GAGGTGATGT GCGGCATGGG GCGTACCGGA CATCTTTTTG CTTGCGACGC AGATGGGGTG GCGCCTGACA TCCTTTGCAT CGCCAAGGGG CTCGGCGCGG GCTATCAGCC GATTGGAGCG ATGCTCTGCT CCAGCGCGAT ATATGATGCG ATTGCGCAGG GCACGGGGTT CTTTCAGCAC GGGCATACCT ATCTCGGGCA TCCGGTTGCC ACAGCGGCAG GGCTTGCAGT GGTCAATCAG ATGCTGGAAC GCGACCTGGT TTCGCGCGTG GCGGAGAAGG GCACGCAGTT GCAAGCGGCG CTGATGGAGC GATTTGCGCA ACACCCCAAT GTGGGTGATA TCCGCGGGCG CGGTTTGTTT CGCGGTCTCG AATTGGTGCA GGACCGCGAC AGCAAAGCCC CGTTTGATCC GGCACATGGT CTTGCCGCGC GGATCAAGCG GGCCGCGTTG GAGGCGGGTC TGATCTGTTA TCCGATGTCG GGCACGCGCG ATGGCCGGAT GGGCGATCAT ATCCTGCTGG CACCGCCCTT CATCCTGAGT GAGACGCAGA TCGAAGAGAT CTGCGACAAG CTGGCGATTG CAATCGAAGA GGGGCTCGCC TCGATCTGA
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Protein sequence | MSHVFPRHTK SDLPTAVGGD GCYLIDANGK RYFDGSGGAA VSCLGHSDAA VIKAVQEQVE KLAFAHTGFM TSEPAEALAD LLISKAPGTL DRVYFVSGGS EATEAAIKLA RQYHLERGEP QRRHLIARRQ SYHGNTLGAL AAGGNAWRRQ QFDPLLIGVS HIAPCYEYVD RSDGESSFDY GQRVANELEA EILRLGPDTV MAFMAEPVVG ATLGAVPAVE GYFKRIREIC DTYGVLLILD EVMCGMGRTG HLFACDADGV APDILCIAKG LGAGYQPIGA MLCSSAIYDA IAQGTGFFQH GHTYLGHPVA TAAGLAVVNQ MLERDLVSRV AEKGTQLQAA LMERFAQHPN VGDIRGRGLF RGLELVQDRD SKAPFDPAHG LAARIKRAAL EAGLICYPMS GTRDGRMGDH ILLAPPFILS ETQIEEICDK LAIAIEEGLA SI
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