| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0119 |
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| Symbol | |
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| ID | 4078704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 125411 |
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| End bp | 126694 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638005406 |
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| Product | branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid binding protein, putative |
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| Protein accession | YP_612114 |
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| Protein GI | 99079960 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.232449 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGA AACTGACAAG CGTGGCGCTG AGCGCACTGA TCGCAGCAAG CCCGGCAATG
GCCGATCTGG TATTCCCCGA TCTCAGCTAT CGCACAGGCC CCTATGCGGC AGGCGGCATT
CCGTTCTCCG ACGGCTACAA CGACTATTTC ACTCTGGTGA ACGAGCGTGA CGGTGGCATC
GGCGGCGTCA AGGCACGCGT GATCGAATGT GAGACCGGCT ACAACACCGA AAAAGGTGTG
GAATGCTATG AATCCACCAA GGGCGAAGGC GCTCTGGTCT ATCAGCCGCT CTCCACCGGG
ATCACCTATC AGCTGATCCC CAAAGTGACC GCCGATGGCA TCCCGCTTCA CACAATGGGC
TACGGTCGGA CCTCGGCCGC CAACGGCAAG GTGTTCTCTA ACGTCTTCAA CTATCCCGCC
AACTACTGGG ACGGGGCTTC GGGTGTGATC AACTACCTGC TCGAAGAAAA TGGCGGCGAC
CTGAACGGAA AGAAGATCGC GCTGGTCTAT CACAACTCTG CCTATGGCAA AGAGCCGATC
CGCACGCTGG AAGAGCTCTC CAAGAAGCAC GGGTTTGAGC TGAGCCTGCT GCCGGTTGAT
CACCCGGGTC AGGAACAGAA ATCGCAGTGG CTTCAGATCC GCCGCGACCG TCCCGACAAT
GTTGTGATGT GGGGCTGGGG CGTGATGAAC CAGGTGGCAA TTCAAGAAGC CTCCAACATC
CGCTTCCCGA TGGAAAACTT CATCGGCGTC TGGTGGTCCG GCGCTGAGCA CGACGTGATG
GCCGCTGGCG ACAAGGCGGA TGGCTATAAG GCCGTGACCT TCCACAACGT TGGTCGTGAC
TTCCCGATCT TTGAAGACAT CCAGACGCAT GTCGTCGACA AGGGTCTTGC GGCAGGCGCT
GGCGATCAGA TCGGCAACGT TCTCTATAAC CGCGGCATGT ATGCGGCGAT GCTTGCTGTC
GAAGCAGCCA AGACCGCACA GGAGATCCAC GGGACTGCCG AAATTGACGC CTCTATGATG
CGTGACGGGA TGGAAGCGCT CTCCATCACG GCTGAAAAGA TGAACGCGCT TGGTATGCCG
AACTTTGGTC CGTCCTTCGA TGTCAGCTGT GAAAACCACG GCGGCCCCGG TCTCGTGGGT
GTGACCCAGT GGGACGCGGA GACCCAGACC TGGTCGCTGG TTTCGGGCTT TAACCCGACT
GACCAAGAGG TGATCGACGC TCTGGTGGCC GAAGACTCCG CATCCTATGC GGCGGAGAAC
AACATCGAAG AGCGCTGCAA CTAA
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| Protein sequence | MKLKLTSVAL SALIAASPAM ADLVFPDLSY RTGPYAAGGI PFSDGYNDYF TLVNERDGGI
GGVKARVIEC ETGYNTEKGV ECYESTKGEG ALVYQPLSTG ITYQLIPKVT ADGIPLHTMG
YGRTSAANGK VFSNVFNYPA NYWDGASGVI NYLLEENGGD LNGKKIALVY HNSAYGKEPI
RTLEELSKKH GFELSLLPVD HPGQEQKSQW LQIRRDRPDN VVMWGWGVMN QVAIQEASNI
RFPMENFIGV WWSGAEHDVM AAGDKADGYK AVTFHNVGRD FPIFEDIQTH VVDKGLAAGA
GDQIGNVLYN RGMYAAMLAV EAAKTAQEIH GTAEIDASMM RDGMEALSIT AEKMNALGMP
NFGPSFDVSC ENHGGPGLVG VTQWDAETQT WSLVSGFNPT DQEVIDALVA EDSASYAAEN
NIEERCN
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