| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0111 |
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| Symbol | |
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| ID | 4078696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 116589 |
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| End bp | 117308 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638005398 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_612106 |
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| Protein GI | 99079952 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGATG CCAATGCCTC TCCGCTTGTC ACCATTCTCG ATGACGAGCC CGAAATCCGC
CAGCTGCTGA CCGAGACGCT GGAGGATGCC GGGTATCGCA CCCAGAGCTT TTCACGCGCC
CGCGATTTCG AGGCCGCGCT CAAGCGGGTG ACTCCCGATG TCTGCCTTGT GGACCTGTCG
CTGCCAGATA CCGATGGTTT GGCGCTGGTA CACCGGCTGG CACTTGAGCA GGGCGCAAGC
GTGATCATCA TCTCGGGGCG TGCACAGGTC CAGGATCGAG TCACGGGGCT GGAACTGGGG
GCGGACGACT ACATCACCAA ACCCTTTGAC CCGGCAGAAG TGGTCGCGCG CATCCGCGTG
CGCCTGCGTG ACACCTCGCG CGGTGGGCAA CCCGACACGG GGGATCGGGC AGAGTTTTCC
GGCTGGACCG CACATTTTGA CCGCTACGCA CTTGAGGATG AGAATGGCGA GGAGACCGCG
TTTTCGCATG CCGAAGGCGA AGTCCTGCGC CTCTTTCTGG AAAGCCCCAA GCGGCTGATC
TCCCGCGCGC AGATGATGGA ACGGCTCGGC GGCGGAGCCG GTGACAGCTT TGATCGTGCG
ATGGATGTAC GTATTTCACG CCTGCGCACC AAGCTGCGCG AAGATCCTAA AAACCCGCGC
CTGATCAAGA CGATCTACGG CGCTGGATAT ATCTTTCTAG GGGATGTGAG CTGGCGTTGA
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| Protein sequence | MPDANASPLV TILDDEPEIR QLLTETLEDA GYRTQSFSRA RDFEAALKRV TPDVCLVDLS
LPDTDGLALV HRLALEQGAS VIIISGRAQV QDRVTGLELG ADDYITKPFD PAEVVARIRV
RLRDTSRGGQ PDTGDRAEFS GWTAHFDRYA LEDENGEETA FSHAEGEVLR LFLESPKRLI
SRAQMMERLG GGAGDSFDRA MDVRISRLRT KLREDPKNPR LIKTIYGAGY IFLGDVSWR
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