| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0004 |
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| Symbol | |
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| ID | 4078667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 4020 |
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| End bp | 4640 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638005291 |
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| Product | lysine exporter protein LysE/YggA |
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| Protein accession | YP_611999 |
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| Protein GI | 99079845 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.309415 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.377015 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCTGA GCCTTTGGGA TCTGGTGATT TATGCCAGCG CTGTTTTTGT GCTGTTTCTG
ACGCCCGGAC CGGTCTGGCT GGCCTTGGTG GCGCGGGCGA TGTCTGGTGG ATTTCACGCT
GGGTGGCCGT TGGCGCTTGG AGTGGCGATT GGCGATGTGG TCTGGCCTCT GGTCGCCATC
CTCGGAGTCG CGTGGATTAC CGCGGCCTCA GCCCAGATTG CACTGGTCTT GAAAGGCGTC
GCCGTTCTCG TGTTTGTGCT TATGGGACTC TCGACAATCC GCAGTGCGGG TCAGCCGATT
TCAACAAACA GCCGTTTGAC CAAGCCCGGA CGATGGGCTG GGTTTGTGGC GGGCGTGATT
GTTATTCTTG GCAACCCGAA GGCTGCCTTG TTCTATATGG GGATCTTACC CGGGTTCTTT
GATCTGTCGC AGGTGACATC GGCAGATATT GCCCTGATTT GCGCGGTTTC CATGGCGGTG
CCGCTGATTG GAAACGTGAT GCTGGCCGGA TTTGTGAGCC AGGTGCGGGT GCTTCTATCG
TCTCCGGTGG CGTTACGACG CATGAATCTC GGTGCCGGCT ACCTGTTGAT CGCTGTCGCC
TGCATAATCC CCTTCACTTG A
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| Protein sequence | MSLSLWDLVI YASAVFVLFL TPGPVWLALV ARAMSGGFHA GWPLALGVAI GDVVWPLVAI
LGVAWITAAS AQIALVLKGV AVLVFVLMGL STIRSAGQPI STNSRLTKPG RWAGFVAGVI
VILGNPKAAL FYMGILPGFF DLSQVTSADI ALICAVSMAV PLIGNVMLAG FVSQVRVLLS
SPVALRRMNL GAGYLLIAVA CIIPFT
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