| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2447 |
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| Symbol | |
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| ID | 8808228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 2566882 |
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| End bp | 2567859 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | |
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| Product | CRISPR-associated protein Cas1 |
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| Protein accession | YP_003461673 |
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| Protein GI | 289209607 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.43322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGACT TATCGCCGAG CGACCTGAAG ACCATCCTTC ACTCGAAACG GGCCAACATC
TACTACCTGC AGTACTGCCG GGTGCTGGTG AACGGTGGCC GTGTCGAGTA CGTCACCGAC
GAGGGGAAGC AGTCCCTCTA CTGGAACATC CCGATTGCCA ACACCACAAC ACTGCTACTG
GGAACGGGAA CCTCCATCAC CCAGGCCGCG ATGCGGGAGC TGGCCAAGGC CGGGGTGCTC
GTCGGCTTCT GTGGCGGAGG GGGAACTCCG CTGTTCAGCG CAAACGAAGT GGATGTAGAG
GTTGCGTGGT TCAGCCCGCA AAGCGAATAC CGGCCGACCG AATACCTCCA GCAATGGGTT
CAGTTCTGGT TCGACGACAC CCGCAGGCTG GCCGCCGCCC GTCGCTTCCA GCTCGCTCGC
CTGGAGCGGA TCGAAGCCAT CTGGCTGCGC GCCAGGACGC TGCCGAACGA AGGCTTCGAT
GTCCCCGAGG ATCAGCTACG CACGCTCCTT GAGCCCATGG AGAGCGCCAT CCGCGCGGCC
GCGACCAACA CCGACCTGCT GACCCTGGAG GCACGACTGA CCAAACAGCT GTTCGGCCTG
GCCTCGCGGA CGGTGGGCTA TGGCGAATTC ACCCGTGCCA AACGCGGCTC CGGGACCGAC
CCCGCGAACC GGTTCCTCGA TCACGGCAAC TATCTTGCCT ACGGGCTCGG CGCGACGGCG
ACCTGGGTGC TCGGCATTCC GCACGGCCTG GCGGTACTTC ACGGGAAGAC GCGCCGCGGC
GGGCTGGTGT TCGATGTGGC CGACCTCGTG AAGGACGCCG TGATCCTGCC TCAGGCCTTC
ATCTCCGCCA TGCGCGGCGA CGAGGAACAG GACTTCCGCC AGGCCTGTGT GGATCGGCTG
ACCCAGGTCG AGGCACTGGA CTTCATGATC GACACCCTGA AGTCGGTCGC CCAGGAGGGC
GGGATGGGCA CCGCATGA
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| Protein sequence | MDDLSPSDLK TILHSKRANI YYLQYCRVLV NGGRVEYVTD EGKQSLYWNI PIANTTTLLL
GTGTSITQAA MRELAKAGVL VGFCGGGGTP LFSANEVDVE VAWFSPQSEY RPTEYLQQWV
QFWFDDTRRL AAARRFQLAR LERIEAIWLR ARTLPNEGFD VPEDQLRTLL EPMESAIRAA
ATNTDLLTLE ARLTKQLFGL ASRTVGYGEF TRAKRGSGTD PANRFLDHGN YLAYGLGATA
TWVLGIPHGL AVLHGKTRRG GLVFDVADLV KDAVILPQAF ISAMRGDEEQ DFRQACVDRL
TQVEALDFMI DTLKSVAQEG GMGTA
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