| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2405 |
|---|
| Symbol | |
|---|
| ID | 8808186 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 2528892 |
|---|
| End bp | 2529824 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | TonB family protein |
|---|
| Protein accession | YP_003461631 |
|---|
| Protein GI | 289209565 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.591559 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGTCT CGCACGGCAC CCTTGAACCC GAATCTCCGC AGCGTCGCGG CCAGCTGGGC
CCGATGCTGT TTCTGGCCGT GGTCGCGCAT GCCCTGATCA TCCTCGGCAT CGGCTTCGCC
GTTGACCCAC TGGACACGCC TTCCCGCGAG CCCCTGGACG TGACCTGGGT GACCGACCCG
GACGCACAGG AGCCAGAGCC GGAAGAGGTC GAGCGCATCG CCACCGAGGA CCAGGCCGCC
AGCGGCGAAG GCGAGGAGGT GCAGGAGGCG CTGTCGCCGG AGGCCGAGGC CGAAGGCATC
GGCGAACCGG AGCCCGAGGG GGTCGAGGCC CCGCTGCCGG ACGCGGGGCC GCTGGTCATG
GAGCCCGCCC AGCCGGAACC CGAACCGGAG CCCGAGGCCG TGGAGGCCGA GACGGACGAA
GCCGCGCCGA CAGCCCCCGA AGTCGCCGAA CCCGAACCGA TCGAGTCCCC TCAGGCGGAG
GAACGCCCGT CGGCCGCCGC GCTGATGAAC CGGGGCCTGG ACACCGCGCG CGCGGCCCCG
GCCGAGGAGC GCCGCGAATT CTCCACCCGC GCCACCCGCA CCCGCTACCT CGACAGCCTC
GCCGCGCGCA GCGCGCCGGA GGCCGCGTAT CTGCAGGCCT GGATCAACAA GGTCGAGCGC
GTCGGCAACC TGAACTACCC CGACGAGGCC CGCCGCCGGG GCCTGTCCGG CACACTGGTG
CTGTCGGTGC GCCTGAACCC GGATGGCGAG CTGATGGATA TCGAGATCGC CCGCAGTTCC
GGCGAGCCGG TGCTGGACCA GGCCGCGATG CGCATTGTGG AGCTGGCCGC CCCTTATGCC
CCCTTCACCG AGCAGATGCG CGAGGAATAT GACGAACTCG TGATCACCCG GACCTGGGCC
TTCCGCCGCG ACCAGATGGA GCAGATTCGG TAG
|
|---|
| Protein sequence | MSVSHGTLEP ESPQRRGQLG PMLFLAVVAH ALIILGIGFA VDPLDTPSRE PLDVTWVTDP
DAQEPEPEEV ERIATEDQAA SGEGEEVQEA LSPEAEAEGI GEPEPEGVEA PLPDAGPLVM
EPAQPEPEPE PEAVEAETDE AAPTAPEVAE PEPIESPQAE ERPSAAALMN RGLDTARAAP
AEERREFSTR ATRTRYLDSL AARSAPEAAY LQAWINKVER VGNLNYPDEA RRRGLSGTLV
LSVRLNPDGE LMDIEIARSS GEPVLDQAAM RIVELAAPYA PFTEQMREEY DELVITRTWA
FRRDQMEQIR
|
|---|
| |