| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2274 |
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| Symbol | |
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| ID | 8808054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 2394485 |
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| End bp | 2395654 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | |
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| Product | Peptidoglycan-binding lysin domain protein |
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| Protein accession | YP_003461500 |
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| Protein GI | 289209434 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.00514615 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTACAAGA CCAGGGCGAC CACGACCTTC GTTCTGCCGG GCATTTTATT CAGTGTAACG
CTGTTGCTCG GCGCCTGCGC AGCCACCCAG ACCGAAGAGG GGGCTGCCAC CGCCGAGGAC
ACCGAGGCCA CACAAACGGC CCGCAGCGAG GACACCTCCC GCGAAACCGA CCGGGCCGCC
GAGACCCCGG AGCCGGAACC CGAGATCCGC GAATCCGCTC CCGAACGCTA CGTGGTCCGC
GAGGGCGACA CCCTGTGGGA CATCGCCGCG ATGTTCCTGC GCGATCCGTG GTACTGGCCG
GAGATCTGGC TGGTGAACCC CGAGATCGAG AACCCGCATC TGATCTATCC GGGCGACGTA
CTCAGCATCT ACTACGTGGA CGGCGAACCG CGCATCACCG TGGATGGCGG CCCGCGCGTT
CGCCCGACCA AGCGTCTGTC GCCCGAGATT CGCGTAGTCG ATCGCGATGA GGATGCGACC
CCGATCTCCA CGCTGCAGTC GTTCATGTTC CGTCCGCAGG TGCTGGACGA CGAGACGCTG
GACAACGCCC CCTACATCCT GGCCTCGCAG GATGAGCGCG TGATCTTCGG CCCGGGCGAC
CGCGTCTACG TGCGCAATGC CGAAGACACC CAGCAATACG ACCTCTATCA CATCGTGCGT
CGTGACGGCG AGCTGGTGGA CCCGGACACC GGCGAGAACC TGGGCATTGC GACCCTGCCG
ATTGGCGAGG CCGAGATCGT CGAGCCCGGC AACGTGGCAC GCGCAAACAT CCGCAAGGGT
GAGCGCGAAG CCATCCGTGG CGACCGCCTG GTCCCCTATG CCGATGAACA GGACATGCTG
TTCGAGATCG GACGTCCGCC AGAAGACCTG GAGGGCACGA TCATCTCCCT GTTCGACGCG
ATCAGCCAGA TCGGCCAGCT CCAGGCTGCG ATCATCAACC GTGGCGAGCG TGACGGCATC
GAGAACGGCC AGGTGATGAC CGCCTACACC GCCGGCCGCC AGGTTCGCGA CCCGATCAGC
GACCGGGCGA ACGAGGTCGT GACCTTGCCC GAGGAATCGG TCGGAACGGT GATGGTGTTC
CAGACCTTCG AGAAGGTCTC CTACATCCTG GTCACGGAGT CCGACCGCAC CCTGCGCGAG
GGTGACAAGG TCCGCCATCC GTCGCACTGA
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| Protein sequence | MYKTRATTTF VLPGILFSVT LLLGACAATQ TEEGAATAED TEATQTARSE DTSRETDRAA
ETPEPEPEIR ESAPERYVVR EGDTLWDIAA MFLRDPWYWP EIWLVNPEIE NPHLIYPGDV
LSIYYVDGEP RITVDGGPRV RPTKRLSPEI RVVDRDEDAT PISTLQSFMF RPQVLDDETL
DNAPYILASQ DERVIFGPGD RVYVRNAEDT QQYDLYHIVR RDGELVDPDT GENLGIATLP
IGEAEIVEPG NVARANIRKG EREAIRGDRL VPYADEQDML FEIGRPPEDL EGTIISLFDA
ISQIGQLQAA IINRGERDGI ENGQVMTAYT AGRQVRDPIS DRANEVVTLP EESVGTVMVF
QTFEKVSYIL VTESDRTLRE GDKVRHPSH
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