Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_2064 |
Symbol | |
ID | 8807839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 2184965 |
End bp | 2185699 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003461291 |
Protein GI | 289209225 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.325549 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGCGT CCCCGGCCCC CGCGGCCACG CGGGAGGTGA TCTTTCGCGC GGCGGGGGTG ACCAAGGTCT ACCGCATGGG CGAGGTGACC ATCCATGCCC TGCGCGGGGT GGATCTGGAG CTCTACACCG GCGAGCTGGT GGTGATGCTG GGGGCCTCGG GCTCCGGCAA GTCGACGCTG CTGAATATCA TGGGCGGGCT GGATACCGCG TCCGAGGGCG AGGTGCGCTA CCGCGACCAG GACCTGGCGC AGGCCTCCGA GCGCACGCTG ACGGCCTTTC GTCGCGACCA TGTCGGCTTC GTGTTCCAGT TCTACAACCT GATCGCCAGC CTGACCGCGC GCGAGAACGT GGCGATTGTC ACCGAGATCT CGCGCGACCC GATGCCACCG GAGGAGGCGC TCGCGCTGGT CGGGCTGGAG GACCGCATGG ACCATTTCCC CTCGCAGCTC TCCGGCGGCG AGCAGCAGCG GGTGGCCATC GCCCGCGCGA TCGCCAAGCA GCCGGCGGTG TTGCTGTGTG ACGAGCCGAC CGGCGCGCTG GATTCGAAGA CCGGTATTCG CGTGCTGGAA GTGCTGCAGC ACATCAATGA ACGCCTGGAT ACGACGGTGG CGATCATTAC CCACAATGCG GTGATCGGCG AGATGGCCGA TCGCGTGATC CACCTGAGCG ACGGTCGCGT GAGCGAGATC CATGAGAATG CCACTCGCCA GTCTCCCTCC TCGCTGCACT GGTAG
|
Protein sequence | MSASPAPAAT REVIFRAAGV TKVYRMGEVT IHALRGVDLE LYTGELVVML GASGSGKSTL LNIMGGLDTA SEGEVRYRDQ DLAQASERTL TAFRRDHVGF VFQFYNLIAS LTARENVAIV TEISRDPMPP EEALALVGLE DRMDHFPSQL SGGEQQRVAI ARAIAKQPAV LLCDEPTGAL DSKTGIRVLE VLQHINERLD TTVAIITHNA VIGEMADRVI HLSDGRVSEI HENATRQSPS SLHW
|
| |