| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2063 |
|---|
| Symbol | |
|---|
| ID | 8807838 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 2182586 |
|---|
| End bp | 2184946 |
|---|
| Gene Length | 2361 bp |
|---|
| Protein Length | 786 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF214 |
|---|
| Protein accession | YP_003461290 |
|---|
| Protein GI | 289209224 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.059319 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGCCC TGAACCGCAA GATCCTGCGT GACCTTGGCC ACCTGAAGGG GCAGGCGGCC
GCGATCGCGC TGGTGATCGC CAGCGGCGTG ATGACGCTGG TGATCGCGGT CACCAGCCTC
GACGCCCTGA CCATCACCAA GGAACGCTTC TACTCCGAAT ATCAGTTTGC CGACGTCTTC
GCGGATATCA CGCGCGCGCC GGAGAGTGCG GTGGAGCGCT TTCGCGATGC GCCAGGCATC
AACCAGATCG AGACCCGCGT ACAGGCCCCG GTGCGTCTGG AGGTCGCCGG CTTCGACGAC
CCGATCCGGG GCACTATGCT CTCCCTGCCG GACGGGGGTG AGCCGCTGCT GAACCGGCTC
TACCTGCGCG AGGGCCGGCT GCCCGAGCCC GGGCGCGAGC GCGAGGTGGT CGTCAGCGAG
GCCTTCGCCG AGGCGCACGG ACTGGGCAGC GGGGATACCC TGCGCGCGAT CATCGACGGC
CGCCTGACCG ACCTGCAGAT CAGCGGCATC GCGCTGTCGC CGGAGTTCGT CTACCAGATC
AGCCCCACCG ACCTGCTGCC GGACTACGAG CGCTACGGCA TCCTGTGGAT GAACCGCCGC
GCGCTGGCCG CCGCCTACGG CATGGAAGGG GCGTTCAACT CCGTCGCCGT GAGTCTGGAA
GCGGGCGCCG ACCCGGAGCC CGTAATCGAG GCAATGGACC GCGCGCTGGC CCGCTACGGT
GGCCTGGGCG CCTACGGGCG CGAGGACCAG TTCTCGCACC GTTTCCTGTC CGAGGAGCTG
ACCCAGTTGC GCGCCCAGGC GGCGATCCTC CCCACCATCT TCCTGGCGGT TGCGGCGTTT
CTGCTGAACG TCGTGGTCGG GCGCATCATC CGCTCGCAGC GCGAGCCGAT CGCGGTGCTC
AAGGCCTTTG GCTACGGCAA CGGCGCGATT GCCGCGCACT ACGGCCTGCT GACCGGGGGC
ATCGTGCTGG CGGGTTGCGT GCTGGGGCTC GCGTTCGGGG CCTGGGCCGC GCAGGGCCTG
GCCGGCATCT ATGCCGAGTA CTTCCGCTTC CCGGAGATGA GCTTTCGCCT GCAGCCCTGG
GTGATGGTGC TGGCGGTGGC CGTGGCGATG GGCGCGGCGA TGCTCGGCAC CTTCCGCGCG
GTCTGGCAGG CGGTGCGCAT GGCCCCGGCC GAGGCCATGC GTCCACCGGC GCCGGAGCGT
TTTCATCGCG GCTGGCTGGA GCGCTCGGCG GCCTGGCGGG CAATCGACCA GCCGACCCGG
ATCATCCTGC GCAACCTGGC GCGCCACCGG CTCAAGTCCC TGCTGTCGGT GATCGGCATC
GGCCTGTCCG GCGGGCTGCT GCTGATGGGC GCCTACCAGC TGAACGCGGT AGATCAGATG
CTGGACACCC AGTACGGGCA GGTCCTGCAG ATGGACATCG ATCTGCAGTT CACCGATCCC
GTGCCGGCGC GCGCGGCCGG CGAGCTGCGC CACGAGCCGG GCGTGCTGGC GGTGGAGACC
TTCCGCGCGG TGCCGGTGCG GCTGGTTGGG GTGAACCGCG AGGAGCGCGT GCGCCTGCTG
GGGCTGGACG CCGCGCCGCG CCTGCGGCAG CTGCCGATGG CGGGCGGGCG CGGCCGGCTG
CCCGAGGAGG GCATCCTGCT GACCGACTAC CTGGCCGAAC AGCTCGGGCT GCGCGTGGGC
GACCCGGTGG AGGTGGAGAT CCTGGAGGGC CGCCGCCGCA CCGTCACGGT GCCGCTGGCC
GGCGTGGTGG AGGAGCCGAT CGGCGTCGGC GCCTACATGT ACCGCCCGGC GCTGAATCGC
CTGATCGGCG AGGGGCCGGC CGTCTCCGGG GCCTGGCTGC TGACCGACCG CGCACAGGAG
GAGGCTCTGT TCCGCAGCCT GTCCGATCGC CCGCGGGTCG CCAGCGTCGG TCTGATCGCG
GAGGCCGAGC GCAACATCCG CGAGTACATC GGCGAGACCA TCATCGTGTT CGCGCTGGTA
TTCGTTGCAC TGGCGGTATC CATTGCCTTC GCCGTGACTT ACAACAATGC GCGCATCACC
TATGCCGAGC GCGCCCGTGA CCTGGCCACG CTGGAGGTGC TCGGCTATTC GCGCGGCCAG
GTGAGCTGGA TCCTGCTGGG CGAGATCGCG GTGCTCACCT TCGCCGCGAT CCCGGTCGCC
TGGCTGACCG GCACCGGGTT CGCCTGGCTG CTGAACCAGG CCTTCGCGAT GGACCTGATG
CGCGTGCCAT TTGTGATTAC GTCACAGGCC TACGGCTTCG CCGCGCTGGG CATCCTGGTC
GCGGCCGGCC TGACCGCCTT CCTCGCCTGG CGGCGCCTGC AGCAGCTCGA CCGCGTGCAG
GCCCTGAAGG CGGCGGAGTA G
|
|---|
| Protein sequence | MRALNRKILR DLGHLKGQAA AIALVIASGV MTLVIAVTSL DALTITKERF YSEYQFADVF
ADITRAPESA VERFRDAPGI NQIETRVQAP VRLEVAGFDD PIRGTMLSLP DGGEPLLNRL
YLREGRLPEP GREREVVVSE AFAEAHGLGS GDTLRAIIDG RLTDLQISGI ALSPEFVYQI
SPTDLLPDYE RYGILWMNRR ALAAAYGMEG AFNSVAVSLE AGADPEPVIE AMDRALARYG
GLGAYGREDQ FSHRFLSEEL TQLRAQAAIL PTIFLAVAAF LLNVVVGRII RSQREPIAVL
KAFGYGNGAI AAHYGLLTGG IVLAGCVLGL AFGAWAAQGL AGIYAEYFRF PEMSFRLQPW
VMVLAVAVAM GAAMLGTFRA VWQAVRMAPA EAMRPPAPER FHRGWLERSA AWRAIDQPTR
IILRNLARHR LKSLLSVIGI GLSGGLLLMG AYQLNAVDQM LDTQYGQVLQ MDIDLQFTDP
VPARAAGELR HEPGVLAVET FRAVPVRLVG VNREERVRLL GLDAAPRLRQ LPMAGGRGRL
PEEGILLTDY LAEQLGLRVG DPVEVEILEG RRRTVTVPLA GVVEEPIGVG AYMYRPALNR
LIGEGPAVSG AWLLTDRAQE EALFRSLSDR PRVASVGLIA EAERNIREYI GETIIVFALV
FVALAVSIAF AVTYNNARIT YAERARDLAT LEVLGYSRGQ VSWILLGEIA VLTFAAIPVA
WLTGTGFAWL LNQAFAMDLM RVPFVITSQA YGFAALGILV AAGLTAFLAW RRLQQLDRVQ
ALKAAE
|
|---|
| |