Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1944 |
Symbol | |
ID | 8807718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 2068206 |
End bp | 2068973 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | pyridoxal phosphate biosynthetic protein PdxJ |
Protein accession | YP_003461171 |
Protein GI | 289209105 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.35633 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGTATC CCGCACCGCT CAAGCTGGGG GTCAACCTCG ACCACATCGC CACGATCCGC CAGGCGCGCC ACACCCCGTA TCCCGACCTG ATGCAGGCGG TGCGCCTGGC CGAAGCCAGC GGCGCGGACT CGATCACCCT GCATCTGCGC GAGGACCGCC GGCATATCCA GGACGACGAT GTTTTCGGCA TCAAGCCGAA ACTCACGGTC CCGATGAATC TCGAGATGGC CGCCACCGAG GGCATGCAGG CCATCGCATT GAAGCTGCTC CCGGAGGCCT GCTGCATCGT GCCGGAAAAG CGCGAGGAGC TGACTACCGA GGGTGGCCTG GATGCGGCCG GACAGCTCGA GCGGCTGCGC GATTTTGTGG CTCCGCTGAC CACGGCCGGG ATCGAGGTCT CGCTGTTCGT GGAGCCGGAT GTGCGCCAGC TGGAGGCAGC GGTCAAGATC GGCGCCCCGG TGGTGGAGCT GCATACAGGC GCCTACGCCA ATGCCCGTGA TGCGGCCGAG CGCGAACGCT TGCTGGCCGG GATCAACGAG GCCGCCGCTG CCGGTCAGGC CATGGGGCTG GTGATCAACG CCGGTCATGG GCTCGATTAC GACAATGTGC GTCCGATCGC TGCGAATCCG GTCTTTCACG AGCTGAATAT CGGCCACTCC ATCGTGGCCC GGGCACTGTT TACGGGATTG CCGGAGGCGG TCAGCCACAT GCGCGGGCTG ATGGACGCCG CCCGCGCAGG CCTGCCCGTC GGCCAGTACC CGGTGTGA
|
Protein sequence | MSYPAPLKLG VNLDHIATIR QARHTPYPDL MQAVRLAEAS GADSITLHLR EDRRHIQDDD VFGIKPKLTV PMNLEMAATE GMQAIALKLL PEACCIVPEK REELTTEGGL DAAGQLERLR DFVAPLTTAG IEVSLFVEPD VRQLEAAVKI GAPVVELHTG AYANARDAAE RERLLAGINE AAAAGQAMGL VINAGHGLDY DNVRPIAANP VFHELNIGHS IVARALFTGL PEAVSHMRGL MDAARAGLPV GQYPV
|
| |