Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1366 |
Symbol | |
ID | 8807132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 1459294 |
End bp | 1459824 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | heat shock protein Hsp20 |
Protein accession | YP_003460608 |
Protein GI | 289208542 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.74874 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.190619 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCTGC AAAAGCTGAA GCCGTGGAAC TGGTTCAAGC GCGAGGAACA GGAACAGCCC GAGGTCCTGC CCGCGCGGCG CGATGACGCC ACGGGCGACC CGCTGCTGCG GATGCACCAG GAGATGGACC GGATGTTCGA CCAGTTCCTT GGCCGTGTGC CAGGCAGCGC CCTCGCGGGC CGTACCGGCT CGCTGTGGCT GAAGCCCAGC GTGGATATCG CCGAGGGACG CAAGGCCTAC CGGATATCGG TGGAGGTGCC CGGGATCTCG GAGGACGAGA TCGACCTTTC CATCGATGGG GACGATCTGA TCATCTCGGG CGAGAAACGC CAGGAACACG AGGAAGACGA GGAGGGCTAC CACCGGATCG AGCGCAGTTA CGGGCAGTTT CGTCGGGTCC TGAGCCTTCC CGGTGATGCC GACACGGATC GTATATCGGC CCGCTTCAAG AACGGGGTGC TGGATGTCCA AGTCCCTCGC CGCAAGGATG GTGAGCGCCC CGGGGTGCGG CGAATCGAGA TTGAACGTTA G
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Protein sequence | MDLQKLKPWN WFKREEQEQP EVLPARRDDA TGDPLLRMHQ EMDRMFDQFL GRVPGSALAG RTGSLWLKPS VDIAEGRKAY RISVEVPGIS EDEIDLSIDG DDLIISGEKR QEHEEDEEGY HRIERSYGQF RRVLSLPGDA DTDRISARFK NGVLDVQVPR RKDGERPGVR RIEIER
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