Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1350 |
Symbol | |
ID | 8807116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 1439326 |
End bp | 1442400 |
Gene Length | 3075 bp |
Protein Length | 1024 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | acriflavin resistance protein |
Protein accession | YP_003460593 |
Protein GI | 289208527 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.0568344 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAATCCGG CTCGACTTAC CGTCCACCGC CCCGTGCTGA CCAGCATGGT GGCCCTGATC GTGGTAATCC TGGGCCTGAC CGCGCTGACC CGCCTCCCGG TCGATCTCCT GCCCGACATC ACCTATCCGG TGGTCACGGT GATGACCTCC TACCCCAACG CCGGGGCCGA GGAGGTCGAG CAACTGGTGA CCCGCCCGGT GGAACAGGCA GCGGCCGCAA TCACCGGGGC CCAGGAGATC CGGTCCACTT CGGCCGAAGG CAACAGCAAT GTGCGCGTCA ACTTTGCCTG GGGCACCGAT ATCCGACAGG CCGTTGATGA CCTGCGCGAT CGCCTGGCGC GCATTGAAGG TCAGCTGCCG GATGAGGCAG ACCGGCCCCT GGTGCGCCAG TTCGACACCC AGGACTCGCC CATCATGCGC CTGGGCGTCG GCTCGCAGCT CGACGCCATC CATCTGCGCA CCCTGATCGA CAACCGCATT GCCCCCCGCC TGGAGCGCAT CCCCGGCGTG GCCGCGGTGG ATACGTTTGG GGGACTGGAA AGGGAAGTGC GCGTCGAGGT CGACCCAGAC CGGATACAGG CGATCGACCT GGGGCTGGAC GACCTGCGCA ACCGGATTCG CGATGCCAAC GTGATTACCC CTGGTGGCCC GATCATGGAC GGTCGCCGTG AATACCGGCT GCGTACACCA GCCGAGTTCC GCTCGGTGGG CGAGATACGC GATACCGTGG TCCAGCGCAG CGAAGATGGC GTCACCTACC TGCATCAAGT CGCCGAGGTC CGCGATACCC ACCAGCGCGT CACCCGTCGT TTCCGGGTCA ACCAGGAAGA AGGTGTCCAG CTGGCCGTGC GCAAATTGGC GGACGCCAAT ACCGTCGAGG TGTCCGAGGC GGTCCACGCC GAACTGGTCC GTCTCAACCG CGACTTCCCG CAGATCGACA TCCGCGCGGT AACGGACGAG GCGGGCTTCA TCCGCAGCTC CATTACCAAT GTCGGGCAGT CCATCCTCTA CGGGAGCGCA CTGGCCGTTT TGGTCCTGCT GGTCTTCCTG CGCAACATTC GTTACACGCT GGTGGCGGCC ACCGCGATTC CTCTCGCGGT CATCTCGACG TTTGGCCTCG TCTACTTCGG CGGGCACTCG CTCAACCTGA TGACCATGGG CGGGATCGCA TTGGGTGTGG GACTGATGGT CGACAACGCG ATCGTAGTGA TCGAGAGCAT CGCCCGAAGG CGAGAGGAAC ACGCGGAGCA AAGCGCCATC GAGGCGGCCG TCACTGGTAC GGGGCGTGTG GCACCCGCAA TCATCGCCAG TACGCTGACC ACCGTCGCCA TCTTCCTGCC GTTGTTCTTC GCCCAGGAAC TGGCCGGGCA GCTGTTCAAA CCACTCGCCG CTGTGGTGGC CTTCGCGCTG GCCGCCTCGC TGATCGTGGC CCTGACCGTG GTGCCGATGC TGATGGCACG CGCCCCGATG CCCAGGCGCG ACACCAGCGC CCTCGCCCGC ATGGAACGGC GCTACCAGGG CCTTTTGCGC GGCACGCTGG CGCATCCCTG GATGGTGATC GGGGTCAGTG CCTTGCTGAT GGTCATCGCA CTGGCCGGTC TGCGGGGCGT CGGCACCGAA TTTCTACCGG CCACCGACGA GGGCGAACTG CGCGTGCATG TCTCCATGGA ACCGGGGACA CCACTCGACG AACTGTACTC CACCATGGCC AGCCTGGAAG AGGTGATTCG CGACGAGGTG CCTGAGCTCC AGAACCTGGT GTCCAGCTCT GGCGCCTCTG CCTTCAGGGC ATCGTCGCCC GCCTCCGGCA ACATGCGCGT AATGGTCGGC TCGCGCGACA GTCGCAGCCG TTCTTCGGAG GAGATTGCCG CTGCCCTGCG CGAGGCCCTG GGTACCCCAC CGGGAACCGA GATCCGTGTC CGCGCCTCCA GCAACATCTT CTTCCGCGGA TTCGGCCGCG GCGATGACGA GGAACGCCTG TCGGTCGAAG TGCGCGGCTT CGAGCTGTCG ACCATGAATG CGGTGCTCGA GCGGTTCGAG GAGGCGCTGG CCGATGTCCC CGGCATTACC GACACGCGGG TGGGAACCGA TGGCGGCCAG CCCGAGTTCG CCACTCGCAT CCATCGCGAT CGCGCTGCAG ATCTCGGCGT GGATGTACGC ACTATTGCCC AGACGCTGGA AACCGCGCTG GGCGGCTCCA GCGCCGGCCA GCTGCGTGCG GGGGGCGACG AGACCCGGAT CTGGGTCCAG TTGCGCGACG CGGATCAGAG CTCACTGGAG GACCTGCTCA ACCTGACCGT GCGCAGCGAG GACGGCGAAC GCGTCGCCTT GCGCAGCCTG ATTTCCTTCG ACACCGAGAT CGGGCCCGAC AGCATCGAAC GACGTGAACA GGCCCGCGTA CGTACGCTAT TCATCAATCT GGGGGATCGC TCGCTGGGCG AAGTGGCGGC CTCGGTCCGC GAGGCCCTGG CAGACATCCC GCTGCCCGAG GAGATCGACT ACTCCGTCAC GGGCGACATC GAAGAACAGG AAGCCGCATT CTCGGAGCTG CTGCTGGGTA CGATGCTGGC CACCCTGCTC GTGTACATGG TCATGGCCAG CCTGTATGAA TCCCTGCGCG ATCCCCTGAT CGTGATGTTC TCGATCCCGC TCGCGATCAT CGGGGTCACC GGCGCGCTGC TGGTCACCGA CACCACGTTG AATGTGCAGT CACTGATCGG CGTCCTGCTG CTGGTCGGCA TCGTCGTCAA CAACGCGATC CTGCTGGTGG ACCGTATGGC CCGGCGGCAC CGCGATGACG GAATGGAACT GCACGAGGCG GTCGTGGCCG CCGCCGGCGA GCGCCTGCGT CCGATCCTGA TGACCACGCT GACCACGATT CTCGCGCTCT CACCCCTGGC CATCGGAATG GGTGATGGCG GCGAGGCCCA GGCCCCGATG GCACGCGTAG TGATCGGCGG ACTGCTGTCG TCTACGCTGA TCACCCTGGT GCTGATCCCG ACGCTCTACC TGCTGTTCCA CCGTCGCGGC AAGCATCCCC AACCCGTCTA CCGAGTCGGA GCCGAAAATG CCTAG
|
Protein sequence | MNPARLTVHR PVLTSMVALI VVILGLTALT RLPVDLLPDI TYPVVTVMTS YPNAGAEEVE QLVTRPVEQA AAAITGAQEI RSTSAEGNSN VRVNFAWGTD IRQAVDDLRD RLARIEGQLP DEADRPLVRQ FDTQDSPIMR LGVGSQLDAI HLRTLIDNRI APRLERIPGV AAVDTFGGLE REVRVEVDPD RIQAIDLGLD DLRNRIRDAN VITPGGPIMD GRREYRLRTP AEFRSVGEIR DTVVQRSEDG VTYLHQVAEV RDTHQRVTRR FRVNQEEGVQ LAVRKLADAN TVEVSEAVHA ELVRLNRDFP QIDIRAVTDE AGFIRSSITN VGQSILYGSA LAVLVLLVFL RNIRYTLVAA TAIPLAVIST FGLVYFGGHS LNLMTMGGIA LGVGLMVDNA IVVIESIARR REEHAEQSAI EAAVTGTGRV APAIIASTLT TVAIFLPLFF AQELAGQLFK PLAAVVAFAL AASLIVALTV VPMLMARAPM PRRDTSALAR MERRYQGLLR GTLAHPWMVI GVSALLMVIA LAGLRGVGTE FLPATDEGEL RVHVSMEPGT PLDELYSTMA SLEEVIRDEV PELQNLVSSS GASAFRASSP ASGNMRVMVG SRDSRSRSSE EIAAALREAL GTPPGTEIRV RASSNIFFRG FGRGDDEERL SVEVRGFELS TMNAVLERFE EALADVPGIT DTRVGTDGGQ PEFATRIHRD RAADLGVDVR TIAQTLETAL GGSSAGQLRA GGDETRIWVQ LRDADQSSLE DLLNLTVRSE DGERVALRSL ISFDTEIGPD SIERREQARV RTLFINLGDR SLGEVAASVR EALADIPLPE EIDYSVTGDI EEQEAAFSEL LLGTMLATLL VYMVMASLYE SLRDPLIVMF SIPLAIIGVT GALLVTDTTL NVQSLIGVLL LVGIVVNNAI LLVDRMARRH RDDGMELHEA VVAAAGERLR PILMTTLTTI LALSPLAIGM GDGGEAQAPM ARVVIGGLLS STLITLVLIP TLYLLFHRRG KHPQPVYRVG AENA
|
| |