| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1020 |
|---|
| Symbol | |
|---|
| ID | 8806777 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 1080902 |
|---|
| End bp | 1081609 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | peptidase C39 bacteriocin processing |
|---|
| Protein accession | YP_003460271 |
|---|
| Protein GI | 289208205 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCATCC GCCGTTGGTT CCTCTGCGTA GTCATCACCA CCGCGCTGAT GCTTTCGCCT
GCCCTGTCCG CATGGGCCGG CGGGGCCCAG TTCCCCGGCA TGATCGGCAG CATGAACGTG
CCGGTGGAGA GCCTGAAAGA CCTGCGCTTT CGCTCCATCG TCCCGCAGCG ATACGACTTC
AGCTGCGGCT CCGCCGCCCT GGCTACGCTG CTCACGTACC ACTACGACCG CCCCACCACA
GAGGTCGAGA CCTTCGACAG CATGTTCCGA CGCGGCGACC AAGACCTGAT CCGCGAACAG
GGCTTCTCCA TGCTCGACAT GAAGCACTAC CTGGAGGCCG AACAGGGCAT GCCCGCCGAC
GGCTTTCGCA TCGGGCTGGA TGACCTCGAC AATCTCGGGG TGCCGGCGAT CGCGATGATC
GAGACTCGGG GCTATCGCCA CTTCGTGGTA ATCAAGGGGC TCGAAGGCGG ACGGGTACTG
GTGGGAGATC CGGCTCTCGG GGTCAACAGC TACACCCGTA ACGAGTTCCA GCAGATCTGG
GTCAACGACA TCCTGTTCAT CATTCGCGAG GACGTGGACC TCGCCCGGCA TCGCTTCAAT
GCCTCCGAAA CCTGGGCCGC CGTGACCCGC GCGCCGATCG AGTCGGGTGT CGTGCGCAGC
GACCTGGCGA GCTTCACCCT GCATCTGCCC CGCGCGAGCG ACTGGTGA
|
|---|
| Protein sequence | MPIRRWFLCV VITTALMLSP ALSAWAGGAQ FPGMIGSMNV PVESLKDLRF RSIVPQRYDF
SCGSAALATL LTYHYDRPTT EVETFDSMFR RGDQDLIREQ GFSMLDMKHY LEAEQGMPAD
GFRIGLDDLD NLGVPAIAMI ETRGYRHFVV IKGLEGGRVL VGDPALGVNS YTRNEFQQIW
VNDILFIIRE DVDLARHRFN ASETWAAVTR APIESGVVRS DLASFTLHLP RASDW
|
|---|
| |