| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_0873 |
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| Symbol | |
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| ID | 8806628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 930668 |
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| End bp | 931645 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_003460124 |
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| Protein GI | 289208058 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.164971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAAAT CGGAGCTTCC GGCGCACCTG ATCCGGCATG CGACGCTGCG TCAGCTGCAG
GTGTTCGAGG CGATCGTGCG CCTGGGGAGC TTTACCCGCG CGGCGGAAGA GCTGCATCTG
ACCCAGCCAA CGGTCTCGAT CCAGATCAAG AAGCTCTCCA CGGCACTGGG GCTCCCGCTG
TTCGAGTACG TGGGGCGCAA GGCCTTCCCG ACCGAGGTCG GGCTGCTGCT GTACGACACC
TGCCGCGAGA TGCTCGGCGC GCTGACCAAC CTCGAGATGA AACTGGCCGA GATGCACGGG
CTCAAGCGGG GGCGTCTGCG CCTGGCGGTG ATCACCACCG CGCAGTACTT CGCGCCCAGC
ATTCTCGGAC AGTTCGCCCG GCGCTATCCC GATATCGAAC TGTCGCTGGA GGTCAGCAAC
TTTGACCGGG TGCTGGAACG GCTGTCGAAC AACGACGACG ACCTCTACAT CATCGGGCAT
GTCCCCGAGC GGCTGACCGA TGTCGCCGTG CACCCGTTCG CTCCGAACCC GCTGGTGGTG
ATGGCCAGCC GCGATCACCC ACTGGTCGGC CGACGCAACA TCCCGCTCAA GGAGCTGGAG
CAGGAAACCT TTCTGATGCG GGAGCCGGGC TCGGGGATCC GCGAGGCGAC GCTCAAGTTG
TTCCAGGAAC ACGGGATCAG CCCGCCCGTG CGCATGGAAC TGGGCAGTAA CGAGGCGATC
AAGCAAGCGG TGATTGGCGG TCTGGGGATC GCCGTGCTGT CGCTGCACAC CCTCAGCGCC
GAGGGGGCCG AGGGCCCCGT GGCGCTGCTG GATGTCGAAC ACTTCCCGAT CCATCGCCAG
TGGCATATCG TCTACCCGAA GAAGAAGGTC CTGTCCGTCG TCGCCCAGAC CTTTCTCGAC
TTTGCCATCC AGGACGAGGC CCGGGTGCGG GCGCAGGTCG AAGACCTGCT GGCTGCGTTC
AAGGCCCAGG CCGGCTGA
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| Protein sequence | MLKSELPAHL IRHATLRQLQ VFEAIVRLGS FTRAAEELHL TQPTVSIQIK KLSTALGLPL
FEYVGRKAFP TEVGLLLYDT CREMLGALTN LEMKLAEMHG LKRGRLRLAV ITTAQYFAPS
ILGQFARRYP DIELSLEVSN FDRVLERLSN NDDDLYIIGH VPERLTDVAV HPFAPNPLVV
MASRDHPLVG RRNIPLKELE QETFLMREPG SGIREATLKL FQEHGISPPV RMELGSNEAI
KQAVIGGLGI AVLSLHTLSA EGAEGPVALL DVEHFPIHRQ WHIVYPKKKV LSVVAQTFLD
FAIQDEARVR AQVEDLLAAF KAQAG
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